| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1406 |
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| Symbol | |
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| ID | 3756154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1422936 |
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| End bp | 1424867 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637782284 |
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| Product | aconitate hydratase |
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| Protein accession | YP_387900 |
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| Protein GI | 78356451 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01342] aconitate hydratase, putative, Aquifex type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.258962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATGA ATCTGACACA AAAGATCATT GCCGCCCATC TTGTAAGCGG CGAGATGACA
CAGGGCGCCG AAATAGGGCT GCGCATAGAC CAGACGCTGA CGCAGGATGC CACCGGCACC
ATGGCGTATC TGCAGTTTGA AGCCATGGGC GTGGACAGGG TGCGCACTGA CCTGTCGGTC
AGCTATGTGG ACCACAACAC GCTGCAGATG GGATTCCGCA ATCCGGATGA CCACCGTTTT
CTGCGCACGG TGGCGCAGAA GTACGGCATT GTCTATTCAC CGGCGGGCAC GGGCATCTGT
CATCAGCTGC ATCTGGAAAA TTTTGCGGTG CCCGGTTCCA CGCTGGTGGG GTCGGACAGC
CACACGCCCA CGGCGGGCGG TATAGGTGCC CTTGCCATGG GGGCCGGCGG GCTTTCCGTT
GCTCTGGCCA TGGCAGGAGA GCCGTATTTC ATCACCATGC CCCGCGTGGT GAAAGTGCGT
CTGGAAGGCC GCCTGAAGGG GTGGGCCACG GCAAAGGATG TCATTCTGCA TCTGCTGGGG
CTGCTGACAG TCAAGGGCGG TGTGGGCAAG GTGTTTGAAT ACGCCGGTCC CGGTGTCGAA
ACCCTCAGCG TGCCCGAGCG TGCCACCATC ACCAACATGG GGGCCGAACT GGGCGCCACC
ACGTCGGTGT TCCCCAGCGA TGAGCGCACC CGCGATTTTC TGAAGGCCAT GGGCCGTGCT
GATGTATGGA AGCCGCTGGC GGCGGATGAC GGGGCGCAAT ACGACGAAGA GGTCGTCATT
GACCTTTCGG CACTGCAGCC GCTGGCTGCG CAGCCGCACA TGCCCGACAG GGTGGTGCCG
GTGGCCAGTC TGGACGGTCT GAAGGTTGAT CAGGTGGCCA TCGGGTCGTG CACCAATTCA
TCATACGCCG ACCTTAAAGG TGCGGTAAGC CTGCTGGCAG GCAACAGGGT ATGCGCCGGC
ACCGATACGC TGGTTTCCCC CGGTTCCAAG CAGGTGCTGA AGATGCTTGC GCGTGAAGGG
CTGGTCGAGC CGCTGCTTGA TTCCGGCGCA CGGCTGCTGG AGTGTTCATG CGGGCCGTGT
ATCGGCATGG GGGGGTCCCC TGTCAGCGGG GGCGTGTCGG CCCGTACCTT CAACCGCAAT
TTTGAAGGCC GCAGCGGTAC CAAAGACGGG CAGGTTTATC TTGTCAGTCC GCTGACCGCA
GCCATGGCTG CTTTGCGCGG CTGTTTCACC GATCCCGCCA CATGGGGAGA AGCTCCCGCG
GTGGCCGATC TGCCCGCCGA AGTCCCTTCC ATCGCTGATT TGTTTGCCTA TCCGCCGCAG
GACGGAGCAG GCACAGAGGT TGTCTACGGG CCCAACATCG TGGCGCTGGA GCGTTTTGAA
CCGCTGCCGG AGCAGCTGCA GGCCGGTGTG CTTATCCGGC TGGGTGACGA TATAACCACC
GACCACATTA TGCCCGCCGG TGCGGAAATA ACCTCGCTGC GGTCCAATGT GCCCGCCATT
GCGCGGCATG TTTTCGGCCG GGTGGACGAA GATTTTGTCA CGCGGGCCGA TGCCTTGGAA
AACGGGGTTA TCGTGGCAGG TGAAAATTAC GGACAGGGAT CCAGTCGCGA ACATGCGGCC
CTTGCTCCGC GCCATCTGGG TGTGCGTGCG GTCATAGCCA AGTCGCTTGC CCGTATCCAC
AGAGCCAATC TTGTGAACTT CGGCATTCTG CCGCTGATTC TGGAAGATAA AGCCGACTAT
GCGCAGCTGG AACAGGGCTG CACCGTCACT CTGGACACCA CGCTGCTGGC TCCGGGAGCC
GTCGTGCAGG TAACAGTGGA CGGCGGCGCT GCAGTGGCTG TCAGGAATGA TTTGACTGCT
AAGGAATTGG ACATTATTCG GGCAGGCGGA TTGCTTAATT ATGTACGTCT CTCGAAAACG
GCTGCTGCTT AG
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| Protein sequence | MTMNLTQKII AAHLVSGEMT QGAEIGLRID QTLTQDATGT MAYLQFEAMG VDRVRTDLSV
SYVDHNTLQM GFRNPDDHRF LRTVAQKYGI VYSPAGTGIC HQLHLENFAV PGSTLVGSDS
HTPTAGGIGA LAMGAGGLSV ALAMAGEPYF ITMPRVVKVR LEGRLKGWAT AKDVILHLLG
LLTVKGGVGK VFEYAGPGVE TLSVPERATI TNMGAELGAT TSVFPSDERT RDFLKAMGRA
DVWKPLAADD GAQYDEEVVI DLSALQPLAA QPHMPDRVVP VASLDGLKVD QVAIGSCTNS
SYADLKGAVS LLAGNRVCAG TDTLVSPGSK QVLKMLAREG LVEPLLDSGA RLLECSCGPC
IGMGGSPVSG GVSARTFNRN FEGRSGTKDG QVYLVSPLTA AMAALRGCFT DPATWGEAPA
VADLPAEVPS IADLFAYPPQ DGAGTEVVYG PNIVALERFE PLPEQLQAGV LIRLGDDITT
DHIMPAGAEI TSLRSNVPAI ARHVFGRVDE DFVTRADALE NGVIVAGENY GQGSSREHAA
LAPRHLGVRA VIAKSLARIH RANLVNFGIL PLILEDKADY AQLEQGCTVT LDTTLLAPGA
VVQVTVDGGA AVAVRNDLTA KELDIIRAGG LLNYVRLSKT AAA
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