Gene Dde_1388 details

Gene Information

• Locus tag: Dde_1388
• ID: 3756175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: +
• Start bp: 1406379
• End bp: 1407065
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637782266
• Product: amino acid transporter LysE
• Protein accession: YP_387882
• Protein GI: 78356433
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0501572
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGCTG AATCATTATG GAGCCTGCTT GCTGCCGCAG GGCCGGAACT GGCCATGCTG 
GCAGGCATAG CGGTGGTGCT TACCGTTACT CCGGGGCCGG ATACTTTTCT GGTGCTGCGC 
AATGCTCTGA CAGGTGGCTC GCGGTGCGGT TTCATGACTG CCTGCGGCAT TGCCAGCGGG 
CTGCTGTTTC ACGCTTTGCT GGCCGGTCTG GGGTTGTCCG CCGTGCTGGT GCATTCCGCG 
CAGGCATATG CTGTTGTGCG CTGGTGCGGC GCGGCGTACC TGATATGGCT GGGCGTAAAA 
GCGCTGGCCG GTGTCCGGCG CGCCGGCGGA CTGCGTGCAG GCCCTGCAGA CGAGGCAGCC 
CCGGCCCCTG CGCTGCAGGC GGAAGCGCCG GGCAGGCGCA AAGCCTATTG TGAGGGGTTG 
GTGACAAATG TACTCAACCC CAAGGTTGCT GTTTTTTATC TTGCAGTGCT GCCCCAGATA 
ATGGGTGCCC GTCCGGAAAT CTGGCGTGCG GTATGGTTCG CCGCCGCGCA TCTGGCGGCC 
ACCGTGTTGT GGTTTGCGTT GCTCAGCAAA GGGTGCGGCA GAGCGGGCAG GCTGCTGCGT 
CCGGTGGTCA TGCGTCGTCT TGACGCTGCT GCAGGCGGTC TTATGCTGCT TTTCGGCGTG 
CGGCTGGCAC TGGAACAGGG GCGCTAG 

 

Protein sequence

MPAESLWSLL AAAGPELAML AGIAVVLTVT PGPDTFLVLR NALTGGSRCG FMTACGIASG 
LLFHALLAGL GLSAVLVHSA QAYAVVRWCG AAYLIWLGVK ALAGVRRAGG LRAGPADEAA 
PAPALQAEAP GRRKAYCEGL VTNVLNPKVA VFYLAVLPQI MGARPEIWRA VWFAAAHLAA 
TVLWFALLSK GCGRAGRLLR PVVMRRLDAA AGGLMLLFGV RLALEQGR