| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1307 |
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| Symbol | |
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| ID | 3755054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1326731 |
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| End bp | 1327390 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637782185 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_387803 |
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| Protein GI | 78356354 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00162338 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATTC CCGTTATCCG CAACGTTCTG GAAGCCAACG AACAGACCGC GGCACAGCTG
CGCAAACTGT TTGCTCAAAG CGATCTGCTG GTTCTGAACC TTATCAGTTC ACCCGGCGCG
GGCAAAACCA GCCTGCTGGA ACGCACTCTT ACCGATCTGA AGGACGAATT CGTCATGGCC
GTGGTGGAGG GCGACCTGCA GACATCCAAC GATGCGCGGC GCGTTGCGGC CACCGGAGCA
AAGGCAGTAC AGATAAACAC CGACGGCGGC TGCCATCTGA ACAGCGCCAT GGTGCTGGAT
GCCGTACAGC ATTTCGACCT GAAAGCAACG GATATCCTGT TCATCGAAAA CGTGGGAAAT
CTGGTATGTC CCGTGGAATT TGACTGCGGC GAAGATTTTA AAATCGCCCT GCTCAGCGTG
ACGGAAGGTG ACGACAAGCC GGAAAAATAC CCTCTGCTGT TCAACCTTTC CGCAGCCATG
GTGCTGAATA AGACCGACCT GCTGCCTTAT GTCGATTTTG ACGTGGAACG CGCACGCCGG
TTTGCCACTC ACCTTAATAA GGACCTTGCT TTCCTGCCTG TTTCATGCCG CTCCGGCGAA
GGGCTGCAAG CATGGTACGA CTGGATACGC ACAGCCGTAA CCGCCAAGCG CGCGGCCTGA
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| Protein sequence | MEIPVIRNVL EANEQTAAQL RKLFAQSDLL VLNLISSPGA GKTSLLERTL TDLKDEFVMA
VVEGDLQTSN DARRVAATGA KAVQINTDGG CHLNSAMVLD AVQHFDLKAT DILFIENVGN
LVCPVEFDCG EDFKIALLSV TEGDDKPEKY PLLFNLSAAM VLNKTDLLPY VDFDVERARR
FATHLNKDLA FLPVSCRSGE GLQAWYDWIR TAVTAKRAA
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