| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1112 |
|---|
| Symbol | |
|---|
| ID | 3755423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 1139687 |
|---|
| End bp | 1141957 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637781982 |
|---|
| Product | heterodisulfide reductase, iron-sulfur-binding subunit, putative |
|---|
| Protein accession | YP_387608 |
|---|
| Protein GI | 78356159 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins
[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0184173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA AAATAGGCGT ATATTTCGAT AAGTCCAACA TCGGCGCCGG GCTTGATCTT
GACGCGCTTT CCGATGTGGT GACCGGCAAG TTCGGCGGCT CGTGTCCTGT TGTAAAAGTA
TTTCCTGTGC TCGGTGCGGA AACCGCCCGT CAGGAAATCC GTCAGGACAT AGCTGAAAAT
GAACTTGACG GTGTACTCAT TATCGGTTCG TCGCCCCGTG TGGACTGGGA CCTGTACCGC
TTTGAAGGCG TGACCGTGGA ACGCGTTAAC CTGCGCGAGC AGGGCGTTCT TGGCTACGGT
GCAAAAGTGG AAGCAGGCGA GGATGCCGAA GCCGACGAAG ATCTTTTCAA ACTGGCTGCC
GACTATGTCC GCATGGGTGT GGTCAAGCTG ACCAAAATGG AAGAAGCCGG CGGCGGCGAA
GTGGAAAGCG TGCGCACCAT CATGGTGCTG GGTGGCGGAT GGACCGGTCT TACCGCGGCT
GTCAATGCGG CCAATTCCGG TTACGATGTG GTGCTGGTGG AAAAGGAAGC CGAACTTGGC
GGACGTGCCA AGGGGCTTTT GAAGACCGTG CCGCTGAAGT ATCCCTACAC CGATGTGCAC
GATACGGGCA TTGAGCAGAA AATAGCTGCC GTTGAAGGCA ATGAGCGCAT CACTGTGCTT
ACCTCTGCCA AGGTGCGCAA GGTTTCGGGG CAGCCGGGCC AGTTTACCGC GGTTGTAAAA
ACCAAGGACG GCAATCAGGA AATTCCGGTA GGTGCCATTG TGATGGCCAC CGGCTGGCAG
CCCATGGATG CCGGTGTCAT GGCTCCCTTC GGCTATGGAA CTCTCGAAGG TGTGGTCACC
GCTGCAGAGT TTGAAAAAAT GGCCAAGGAA GGCACCCTGA AAGCCAGAAG AGTAGCTTTC
ATCCTGAATA CCGGCCTTGT GGACGGCGGT GATATTTACA CGTCTGTCTG CGATGAAGAA
CCCGCAGAGG CCGCCGCAGC CAAGCCCGAG GCCGAAGACG ACGAGCAGAC CTCCTACGAG
CACAAGGACC TTGAGTCCTT GCGCCACCTG CCGTACACCA ACGCCATCAG CAGCGTTGTG
GCTCTGAAGC AGGCAGGCTA TGTGTGCGAT GCCAGCGAAG ACGGACAGGC TTTTATCCTG
TACGACTCCA TGGTGGTGCA GGGCATACAC GAGCGCTTCT ACAAAGCCGC TCAGGACAAG
CTGGGCGTCA TGATGTCCAA GGCCGACATT ACCGGTGTCG CACAGGCCGA AGACGGTGGC
CTGCTGGTGC GCGCTGCCAA CACCCTGATG GGTGAAGATG TCGAAATCAG GGTGGACATG
GTTGTACTGC CCACCGGTAT GGTTCCTTCC ACCGCCAAAG ACCCGGTGGT ATGGTTCGAT
TACCGTCAGG GGCCGAATCT GCCCGACCTT GATCTCTTTG ACGGCTATGC CGATTCCAAC
TACATCTGCT TCCCCTACGA AACCCGTCGT ACCGGGTTGT ACGCCGCAGG CTGCGTCCGT
CAGCCCATGA TGCTGGACGC GGCCGAAGAA GATGCCATCG GGGCCACCAT GAAGGCCATC
CAGTGCATCG AATCGGCCAA CCGCGGCATG GCTGTACATC CCCGTTCGGG CGACCTGTCG
TACCCCATAT TCAACTTCGT GCGTTGCACC CAGTGCAAAC GCTGCACCGA GGAATGTCCG
TTCGGCGCGC TGGACGACGA TGAAAAGGGA ACGCCGAAGC CCAACTTCAG CCGGTGCCGC
CGCTGCGGTA CCTGCATGGG CGCCTGCCCC GAGCGTGTCA TTTCGTTCGC CAACTACAAC
ATCGATCAGA TCGGTTCCAT GATCCGCGAG ATCGAAGTTC CGGACGACAT GAACGCCGGC
GGTCCCCGCG TTCTCATTCT GGCCTGCGAA AACGACGCCT ATCCTGCGCT GGATATGGCC
GCACTTCGCG GGCATCACTG GAGTCCCTAC GTGCGTATCA TTCCTGTGCG CTGCCTTGGA
TCGGTTAACG CAATCTGGGT TGCCGACGCC ATGTCAAAGG GTATCGACGG TGTGATGCTG
CTGGGCTGCA AGTACGGTGA CGATTACCAG TGCCATTTTG TCAAAGGCTC TGAAATCTGC
AACCGCCGCA AGGAAAACAT TGCCGAGACG CTCAACCGTC TTGGTGTGGA ACCTGAACGC
GTGGAGCAGT ACGAAGTCGC CATCGACGAA TACGACAAGC TGCCCGGCAT GATCGACGAG
TTCATGAACA TGATCCTTGA AAAGGGCCCC AACCCGTTCA AGGGTTACTA G
|
|---|
| Protein sequence | MAKKIGVYFD KSNIGAGLDL DALSDVVTGK FGGSCPVVKV FPVLGAETAR QEIRQDIAEN
ELDGVLIIGS SPRVDWDLYR FEGVTVERVN LREQGVLGYG AKVEAGEDAE ADEDLFKLAA
DYVRMGVVKL TKMEEAGGGE VESVRTIMVL GGGWTGLTAA VNAANSGYDV VLVEKEAELG
GRAKGLLKTV PLKYPYTDVH DTGIEQKIAA VEGNERITVL TSAKVRKVSG QPGQFTAVVK
TKDGNQEIPV GAIVMATGWQ PMDAGVMAPF GYGTLEGVVT AAEFEKMAKE GTLKARRVAF
ILNTGLVDGG DIYTSVCDEE PAEAAAAKPE AEDDEQTSYE HKDLESLRHL PYTNAISSVV
ALKQAGYVCD ASEDGQAFIL YDSMVVQGIH ERFYKAAQDK LGVMMSKADI TGVAQAEDGG
LLVRAANTLM GEDVEIRVDM VVLPTGMVPS TAKDPVVWFD YRQGPNLPDL DLFDGYADSN
YICFPYETRR TGLYAAGCVR QPMMLDAAEE DAIGATMKAI QCIESANRGM AVHPRSGDLS
YPIFNFVRCT QCKRCTEECP FGALDDDEKG TPKPNFSRCR RCGTCMGACP ERVISFANYN
IDQIGSMIRE IEVPDDMNAG GPRVLILACE NDAYPALDMA ALRGHHWSPY VRIIPVRCLG
SVNAIWVADA MSKGIDGVML LGCKYGDDYQ CHFVKGSEIC NRRKENIAET LNRLGVEPER
VEQYEVAIDE YDKLPGMIDE FMNMILEKGP NPFKGY
|
|---|
| |