| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1100 |
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| Symbol | |
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| ID | 3755411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1127597 |
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| End bp | 1129135 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637781970 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_387596 |
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| Protein GI | 78356147 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGATA CGCTTTCCGA CCGGTTGTCG TCGGTATTCA AGAAGTTCAG CGGCCAGAAA
CGGTTAACTG AAGAAAACGT GCAGGAAGGC CTGCGCGAAG TCCGACTTGC GCTGCTGGAG
GCCGACGTCA ATTTCAAGGT CGTCAAGCAG TTCATCGACC GTGTGCGCGA TAAATGCCTT
GGTCAGGACG TGCTCAAGGG CCTGAATCCC GCGCAGCAGG TTATCAAAAT CGTCAATGAC
GAAATGATTG AACTGCTGGG CGGCGAAACC ACGGGCCTCG ACCTGCGCGG CCAGCAGCCT
TATGTCATCA TGATGGTGGG TCTGCAGGGG TCTGGTAAAA CCACCTCTAC CGGCAAACTG
GCCAACCATC TGCGTAAAAG CAAAATGCGG CCGTACCTTG CACCGGCCGA CGTCTACCGC
CCGGCAGCCA TCGACCAGCT GAAAACACTG GCGGCGCAGC TTGACCTGCC CGTGTATGAT
TCCACGGTGC AGATGAACCC CGTGGACATT GCCAGAAATG CGGTGGCCGC AGCCAGAGAA
CAGCAGTGCA ACGTTGTCAT TCTTGACACC GCCGGCCGGC TGCACATTGA CGAAACGCTC
ATGCAGGAGC TTGTGGCCAT TAAAGAGGCC GTGGCTCCGC AGGAAATTCT GTTCGTGGCC
GACGCCATGA CGGGTCAGGA CGCCGTGACG GTGGCAGATG CGTTCAACAA CGCGCTGGAC
ATCACCGGCG TGGTGCTGAC CAAAATGGAC GGCGATGCCC GCGGCGGCGC GGCCCTGTCC
ATCAAGACTG TCACCGGAAA ATCGGTGAAA TTCGTCGGCA TGGGCGAAAA GCTCTCCGAC
CTTGAAGTGT TCCACCCTGA CAGAATTGCC AGCCGCATTC TGGGCATGGG TGACGTACTG
ACGCTGATAG AAAAGGCGCA GACCACCATC AAGGAAGAAG AAGCTGAAGA ACTGGGCCGC
AAAATGCAGC GGGCCGAGTT CGACTTTGAA GATTTCCGGA CTCAGATGCG CCGCATGCGC
AAACTGGGTT CGCTCGAAAG TATCATGAAG CTGATTCCCG GCATGGGTGC CCTGCGCGAA
AAGCTGGGCG ACATGCAGGT TCCTGAAAAG GAAATGGTCC GCATAGAGGC CATCATCAAC
TCCATGACGC GGCAGGAAAG GCGCCAGCCC ATCCTGATGA ACACCAGCCG CAAGGAACGT
ATAGCCAGAG GTGCCGGCAC CACCGTGAAA GAGGTGGATA AACTGCTGAG CAACTTTGAA
GGCATGCGGC AGATGATGAA GCAGGTCATG GGCGGCGGAA AAAAGAAAAA AGGCAAAATG
CCCCAGCTGC CCGGCATGGG CGGCAAAGGC ATGCCCGATC CTTCGGCCAT GAGCGGTATG
GGCGGACTGC CCGGTATGGG CGGCTTTCCC GGTATGCCCG GCATGCCCGG CATGGACGGC
ATGCAGCCTT CCGGTCCCAG CAAATCGGAC CAGAAGAAAA AACGCGACCA GCGTAAAAAA
GACAAACAGA AAAAGAAACA GGGCAAGAAA AAAAGGTAA
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| Protein sequence | MFDTLSDRLS SVFKKFSGQK RLTEENVQEG LREVRLALLE ADVNFKVVKQ FIDRVRDKCL
GQDVLKGLNP AQQVIKIVND EMIELLGGET TGLDLRGQQP YVIMMVGLQG SGKTTSTGKL
ANHLRKSKMR PYLAPADVYR PAAIDQLKTL AAQLDLPVYD STVQMNPVDI ARNAVAAARE
QQCNVVILDT AGRLHIDETL MQELVAIKEA VAPQEILFVA DAMTGQDAVT VADAFNNALD
ITGVVLTKMD GDARGGAALS IKTVTGKSVK FVGMGEKLSD LEVFHPDRIA SRILGMGDVL
TLIEKAQTTI KEEEAEELGR KMQRAEFDFE DFRTQMRRMR KLGSLESIMK LIPGMGALRE
KLGDMQVPEK EMVRIEAIIN SMTRQERRQP ILMNTSRKER IARGAGTTVK EVDKLLSNFE
GMRQMMKQVM GGGKKKKGKM PQLPGMGGKG MPDPSAMSGM GGLPGMGGFP GMPGMPGMDG
MQPSGPSKSD QKKKRDQRKK DKQKKKQGKK KR
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