Gene Dde_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1099 
SymbolrpsP 
ID3755410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1127275 
End bp1127514 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content57% 
IMG OID637781969 
Product30S ribosomal protein S16 
Protein accessionYP_387595 
Protein GI78356146 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.280704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTTA AACTCAGACT GACCCGTATG GGCAACAAGA AACGCGCTTT CTACCGCATC 
ATTGCTATCA ACAGCGAGGC CCGTCGCGAA GGCCGTCCTC TGGATTACAT CGGTTACTAC
AACCCCATGG TGGACCCCGC CGAAGTCAAG ATCGACACCG AAAAGGTGCA GAAGTGGCTC
GAACGCGGCG CCGAACCCAC CGACACGGTA CGCGCTCTGC TGAAAAAGAA CGCACAGTAG
 
Protein sequence
MAVKLRLTRM GNKKRAFYRI IAINSEARRE GRPLDYIGYY NPMVDPAEVK IDTEKVQKWL 
ERGAEPTDTV RALLKKNAQ