Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1071 |
Symbol | |
ID | 3755457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1096568 |
End bp | 1098976 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637781940 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_387567 |
Protein GI | 78356118 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.43493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGGCC ATGCATGCAG GCTCCGGACC GTTTGCGTGC GGGCCGTGTG CGCCGTCTGG CTGATTGCTC TGTACGCGGC CGGTGCCGTG GCTGCTCCTG CCGTTGCGGC CGCTGCCGTG GGGGGCGCTC CGGCACGGGC GCTGCTTATT TCATCTTATC ACCCTGGATT CCCGACTTTT TTTGACCAGA TAGCGGGCCT GCGTTCTCAG CTTGATGCCG CCGGAGTGCT GCTGGATGTG GAATTTATGG ATTCCAAGCG GTTTGCTCCC GAAAAGGTTT CGCCCCTGTT CAAAGACATG CTGAAGCGCA AGCTGGCGGT ACTGCCGCCG TATGATATCG TGTTCTGTGC CGATGATAAC GCGCTGCAGT TCATGCTTGA GCACGGCAGA GAGCTTTTCC CCCTTACTCC GTGCATTTTT ATGGGCATCA ACAATGTGGG GCTGGCTGTC TCGCTGCGGC AGGATGAACT GTTTACGGGC GTGGTGGAAT CTGTATCCGT GACGCAGACC CTTGCGCTGG TGCGGCAGCT TTTTCCTCAG ATGACCGGCG TTGCTGTGCT GGTGGACGGC ACTCCCAGCG GACAGGGTGA CCTGAAAACC GTTCTGGCTG CGGAACGGGA CTTTCCGGAA CTCAGCTTTT CGGTGATTTC TCTGCAGGAT ATGAGCTGGG ATGCCTTTGG CGCGGCACTG GAAAAGGTGC CGCCGACCAG TGTCGCACTG CTGCTTTCGG CGTATGTCGA TGCCGCCGGC GAACGCAGAA CATTTGAGTC ATCGCTGGAT TTTATAGCTG CCCACCTGCG TGTTCCGCTG CTGCATCTGT GGGAGCACGG CATAGGAGAG GGCGTGCTGG GGGGACGTGT GGTCAGCCAT CACGAACAGG GACGGTTAGC CGGCATGCTG GGGCTGCGGG TGATGCGGGG CGAATCCGCT GCCGTGGTGC CGGTGGTGCG CGGTGATGCG GCTAACAGAT ATATTTTTGA TTTCAGACAG CTGGAAAAAT TCGGCGTGCG GCTGTCGCGC CTGCCTGAAG GCAGTGAAAT ACGGTATCGC AGCAGTACGG TATGGGAGCG TAACCGCTGG GGCATTATCA TCGCTGTGCT GGTGGTGCTG CTGCAGGCAC TGGTCATACT CATGCTGCAT ACGAGCAGGC GCCGTCTGCG CGACAGTGAA GAGGAACTGC GCCTGTGGGG TGTGGTGTTC CGCCATGCGG GGTGGGGCAT AGCGCTGGGG GTGGGCGATG ATGACAGGCT GACTCTTGTG AACCCCAGAT ATGCCGAGAT GCACGGGTAT ACCGTGGAAG AGATGCAGGG CATGTCGGTG CTGGAGCTGT ATCCGCAGCG GGAATGGGCC GCACTGAAAA GCCAGCGTGC GCGTGCGCTG GCAGACGGCC GCGCAGAACA GGAAAGCGTG CACCTGCGTA AGGACGGCAG CAGTTTTCCG GCGTGGGTTG ATATTTCCGT CGTACGCGGC AGTTCGGGCG GCGTTACTTA CAGAGTGGTG AATGTGCAGG ACATATCGGA GCGGGTGCGT ACACAGGAAC TGCTGGTTGA AACGGAAAAA ATGATGTCTG TGGGCGGACT GGCAGCAGGT ATGGCGCACG AGATAAATAA CCCTCTGGGT ATTGTGCTGC AGAGTGTGCA GAACATGCAG CGCCGCCTTG ACCCGTCACT GGAAGCCAAC GCACGCGAAG CAGCAGCCTG CGGGGTGAAT CTGGAAAATG TGCAGACGTA CATGGAGCGG CGCAGCATTA TGCGCTCGCT CGAGCATATC CGCGAGGCAG GACTGCGTGC GGCCGAGATA GTACGCAACA TGCTGGATTT CACCAGACGC AACGATGCCG GACGCAGCAC CTGCGACATT GCCGTGCTGC TGGAAAAGGT GCTGATGCTG GGGTCCAGCG ACTACGACCT GAGCAAAAAA TATGACTTCA GGAATATACG CATAGTAAAG GATATTGAAG CGGACCTGCC CGCCGTACCA TGTGTGCGCA CAGAGATTGA ACAGGTTTTT TTCAATATCA TCCGTAATGG TGCCGAAGCC ATGAGCGAAC ACCCCGTGGC AGGCAGGGTG CCCACCCTTG TCATCTGCGC GCGCCGTTCC GGCCGCTGGC TGCTGGTCGC CATACGGGAC AACGGGCCGG GCATGTCCGG CGAGGTGCGC AGAAGAGTGT TCGAGCCGTT TTTCACCACC AAGCCGGCAG GCAGAGGTAC CGGTCTGGGG CTTTCGGTGT CGTATTTCAT CATCACGCGT AACCACGGCG GCAGGATAGA GGTGCACTCG ACACCTTACG AAGGCTCCGT CTTTCTGGTG GCCTTGCCTG TTCCGGGGCA GCCCGCCGGG GCGGATGACG CTCCTGATTT TCCCCTTATG GATGAACTGA GCCGCAGGGC GTTGCTCGGT GCGGGCTAG
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Protein sequence | MPGHACRLRT VCVRAVCAVW LIALYAAGAV AAPAVAAAAV GGAPARALLI SSYHPGFPTF FDQIAGLRSQ LDAAGVLLDV EFMDSKRFAP EKVSPLFKDM LKRKLAVLPP YDIVFCADDN ALQFMLEHGR ELFPLTPCIF MGINNVGLAV SLRQDELFTG VVESVSVTQT LALVRQLFPQ MTGVAVLVDG TPSGQGDLKT VLAAERDFPE LSFSVISLQD MSWDAFGAAL EKVPPTSVAL LLSAYVDAAG ERRTFESSLD FIAAHLRVPL LHLWEHGIGE GVLGGRVVSH HEQGRLAGML GLRVMRGESA AVVPVVRGDA ANRYIFDFRQ LEKFGVRLSR LPEGSEIRYR SSTVWERNRW GIIIAVLVVL LQALVILMLH TSRRRLRDSE EELRLWGVVF RHAGWGIALG VGDDDRLTLV NPRYAEMHGY TVEEMQGMSV LELYPQREWA ALKSQRARAL ADGRAEQESV HLRKDGSSFP AWVDISVVRG SSGGVTYRVV NVQDISERVR TQELLVETEK MMSVGGLAAG MAHEINNPLG IVLQSVQNMQ RRLDPSLEAN AREAAACGVN LENVQTYMER RSIMRSLEHI REAGLRAAEI VRNMLDFTRR NDAGRSTCDI AVLLEKVLML GSSDYDLSKK YDFRNIRIVK DIEADLPAVP CVRTEIEQVF FNIIRNGAEA MSEHPVAGRV PTLVICARRS GRWLLVAIRD NGPGMSGEVR RRVFEPFFTT KPAGRGTGLG LSVSYFIITR NHGGRIEVHS TPYEGSVFLV ALPVPGQPAG ADDAPDFPLM DELSRRALLG AG
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