| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1040 |
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| Symbol | |
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| ID | 3755504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1067852 |
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| End bp | 1069195 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637781909 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_387536 |
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| Protein GI | 78356087 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0115188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACCG TTATACCGCA TACACACGAC ACGCCTGCCG CCGCACCGGT ACGTTCCGGC
GCTGTGGCCG TGGTGGTGGG CACCGGCCGT TCCGGCACGG CTGCCGCACG TCTGCTGCAC
CATCTCGGGG CGTCAGTCCG CATAGTCGAA AAAGACGAAA GCCGTGTTTC CGCCGAATTC
GCCTCGCTGG CGGCTAGACT GGGATTTGAC TGCCGCTACG GCAGCCACAG CGCAGAACAG
TTTGCAGGTG CCGATATTCT GGTACCCAGC CCCGGCGTGC CGGTGGCATC ACTGCTGCCG
TATCTTGATG CCTCCCGCCC GCCGGAAATT ATGGCCGAAA TTGATCTGGC TGCGCGCTGC
GTGACCAGTC CGGTGCTGGC TGTTACCGGC ACAAGCGGCA AAACCACAAC CGTCAGCCTG
TGCGCGGCTA TGCTGCGTGC AGCGGGCAAG CGTGTTTTTC TGGGGGGCAA CATAGGCACG
CCCCTGTCGG AATATGTGCT GGATGTGGCT GCTGGTGAGG CTCCCGCCGA TGTGCTGGTG
CTGGAAGTCA GCAGTTTTCA GCTGCAGACA TGCACCACAC TGCGGCCCGA AGTGGCGGTG
CTCATAAATA TTTCTGCCAA CCACCTCGAT TACCATGCTG ACATGCAGGA GTACCTTGAT
GCCAAGTTCC GGCTGTTTGC CCTGCAGGGG CCGGATGATC TGGCCGTGCT GCAAAGCGGC
ATGGAGGAAC TTGCCGACCG CTATGCGCTG GCGGCCCGCC GCGAGTTTTT CGATGCTGTG
CGGCGTTTTC CGCGCACGGC GCTGCTGGGC AGTCATAACA TGGCCAACAT AGAGGCAGCC
TGGCTTGCCT GCCGGGCTTT CGGCGTGACG CAGTCGCAGG CGGCGCAGGC GGTGGAAGAG
TTTGCCCCGC TGGAGCACCG GCTGGAAAAG GTGGACGAGG TGGCCGGCGT GCTTTTTGTC
AATGATTCAA AATCAACCAC GGTGGATTCC ATGAAGGCGG CGCTGGAAAG TTTTGACAGG
CCCGTATTGC TGCTGTGCGG CGGCAAATGG AAGGGAGGGG ATCTTGTATC GCTGATTCCC
GTCGTCCGCC GTCATGCAAA AGCCGTGGGG CTGTTCGGCG CCAGCAGAGA AATTTTTGAA
CACGCGTGGG CGGATGTGGT GCCCATGAGC TGGGATCATG ACCTGCAGAC GGCGTTCAGA
CGTATGACGG CCATGGCACA GCCGGGCGAT GTGGTGCTTA TGTCGCCTGC CACGTCCAGT
TATGACCTGT ACAGCAACTA CAAGGAACGC GGCGGAGATT TCAAGCGGAA TGTGGCCGCG
TGGAAAGCGG AGCGTGACGA CTGA
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| Protein sequence | MHTVIPHTHD TPAAAPVRSG AVAVVVGTGR SGTAAARLLH HLGASVRIVE KDESRVSAEF
ASLAARLGFD CRYGSHSAEQ FAGADILVPS PGVPVASLLP YLDASRPPEI MAEIDLAARC
VTSPVLAVTG TSGKTTTVSL CAAMLRAAGK RVFLGGNIGT PLSEYVLDVA AGEAPADVLV
LEVSSFQLQT CTTLRPEVAV LINISANHLD YHADMQEYLD AKFRLFALQG PDDLAVLQSG
MEELADRYAL AARREFFDAV RRFPRTALLG SHNMANIEAA WLACRAFGVT QSQAAQAVEE
FAPLEHRLEK VDEVAGVLFV NDSKSTTVDS MKAALESFDR PVLLLCGGKW KGGDLVSLIP
VVRRHAKAVG LFGASREIFE HAWADVVPMS WDHDLQTAFR RMTAMAQPGD VVLMSPATSS
YDLYSNYKER GGDFKRNVAA WKAERDD
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