Gene Dde_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1019 
Symbol 
ID3755521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp1042021 
End bp1043091 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content62% 
IMG OID637781888 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_387515 
Protein GI78356066 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.16029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATTG CAGTAGCCGT CAGCGGCGGA ACCGACTCGC TTTTCGCCCT GCTTCAGGTG 
CTGGAGGCCG GTCATCAGGT CACGGCGCTG CACGCGCACT TTCTTTCTCC GCACGATACC 
CCCGAAACCA CCGCGCACAA TACCCAGGCC ATAGAAAAGG CCTGCCGCGC GCTCGGGGCA 
GATTTTCATG TTGAAGACCT TTCCGCGGCA TTCAGAAAGC ATGTCATCGA GCCGTTTATC 
GATGCTTACA GACAGGGCAG AACTCCCAAC CCCTGCGCAC GGTGCAACGC CTCCATGAAA 
TTCGGACTGC TGGCCGACAC GGCCCGCAAA CTGGGGGCAC AGGCCATCGC CACAGGTCAC 
TACGCCCGCC TGCAGCCCGA TCTGCCGCGC CCCGGCAATA CGGTCTCGCT GTGGCGCGGA 
GACGACCCCG CCAAAGATCA GAGCTATTTT CTGTCGCTTG TACCGCAACA CCGTCTGGCC 
TGTGCCGTAT TTCCGCTGGG CGGCTGGCGC AAGCAGGATG TCAGAGCGCA TCTGAAGCAG 
CGCGGCATAG TTCCCCCGCT GCCGTCGGAA AGTCAGGAAA TATGCTTCAT CCCCGGCGAT 
GATTACCGCG CATACCTGAC GGCCCATGCA GCCGGACTGC CCGGAGCAGG GCCCATGGTT 
CTGCGTGACG GCCATGTGGT GGGACACCAT AACGGTCTGT GGCAGTATAC CGAAGGGCAG 
CGGCGCGGCC TTGGCATTGC ATGGAGCGAG CCGCTGTATG TGCTGGAAAA AGACGTTTCA 
CGCAATGCGC TGGTGGTGGG CACCAGAAAG CAACTCACTG CCCGCGGCTG CCGGTGTGTC 
GGGGTGAACA CACTGGTGCC GCCCGACCAG TGGCCTGATG CCGTCTATGT AAAGACACGC 
TACAGGCAGA CCATGATTGC CGCGCAGGTA ACTCCCGATG CAGACGGGGC AGACACCATG 
CGGGTGATTT TCGCCGCAAG CCATACTCCT CCGGCTGCGG GGCAGGTGGC CGCAGTCTAC 
GATGCCGCAG GCAGGGTTCT GGCGGGCGGC ATCATCGCAT CGGTCTTTTA G
 
Protein sequence
MHIAVAVSGG TDSLFALLQV LEAGHQVTAL HAHFLSPHDT PETTAHNTQA IEKACRALGA 
DFHVEDLSAA FRKHVIEPFI DAYRQGRTPN PCARCNASMK FGLLADTARK LGAQAIATGH 
YARLQPDLPR PGNTVSLWRG DDPAKDQSYF LSLVPQHRLA CAVFPLGGWR KQDVRAHLKQ 
RGIVPPLPSE SQEICFIPGD DYRAYLTAHA AGLPGAGPMV LRDGHVVGHH NGLWQYTEGQ 
RRGLGIAWSE PLYVLEKDVS RNALVVGTRK QLTARGCRCV GVNTLVPPDQ WPDAVYVKTR 
YRQTMIAAQV TPDADGADTM RVIFAASHTP PAAGQVAAVY DAAGRVLAGG IIASVF