| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0886 |
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| Symbol | |
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| ID | 3755650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 915787 |
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| End bp | 917415 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637781752 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_387382 |
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| Protein GI | 78355933 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGCA GTCAGAGCAT TGCTTCACGT ATCCGTTTTT TTTCCTTTCT GCTTGTAACG
CTGCCTCTTT GCGTGTCTCT GCTCACGTTT GCTGTTGTCA GCCGCATTCT GGTTGTGGGC
GGTGCGCACC ATGACATGGT GGTGGAGCTG CAGCACCACA AACTGACCAC CGAAAGATGG
CTTAACGAGC AACTGCAAAG CATCACATTT TTTGCCCATA CCGGCATCAG CGACCTGCAC
GATACAGCCG CGCTGCAACA GGCTTTGCGC GTTTTTCTTA ATTACCACAC ATCGTTCAGT
CAGGTTTTTT ACGCCTCTCC CGATGGCTCA CTGCTGACAG GGCCGGAACT GCCCGTGCCG
ATCAATGTAG GTGACCGCGG CTACTTCCAA AAAGCCCGTC AGGGCCTGCC CGTGGTTTCT
CCGGTGCTGG TAAGCCGCTT TTCGCACAAC CCGTCGCTTA TTTTCTGCGC GCCGCTGCCT
TTTGCCGACG GCCGCTTTGC AGGAGCTGTC ATCGGCGTGA CAGACCTGCG CACCCTTGAC
GAGGCCCTGC TGCGCCTGCA CCGCCGCCAG AACGATCAAA GCTTTCTGGC CACTGCCGAC
GGATACCTGC TGACCAGCAG ACTGCAGGAA AACACCATCA TCCTGCCGCG CTATAATCCG
GAAGGCATTC CCGTCACGCG AACCGTACTG CCGCCCGAAG ATTCGCTGAG CACACCGCAT
TTTTACCGCA ACACTCAGGG CGTGTATGTG CTGGGCGTCA GACTGGCTTT CAAATCCGGC
CAATGGCTGC TGGTGCAGGA AAGACCAGTG CGTGCCATGC TGGGCGGATA CAGCTGGATA
ATTGCCATGA CCATGGCGGG CGCTCTGGCC ACCGCAGCCC TGCTCATCCC GTTTCTGCTC
AAAGCGGGCA GACGCATAAC CGGCCCCATA GAAGAGATAT CAACCATGTC GGAAGAGCTG
ACCCACGGGC ACTACGACAA GGAATGTCCC TATCTGCACA CCGCCGATAT GCCGCCTGAA
ATACGCAGAC TGTACGACAA CTTCTGCTTT ATGGCGGAAC GCGTTTCACA GCAGATGCGC
GATCTGGAGC ATCTTTCTTT CTGCGACACG CTGACCGGCC TGCACAACAG GCGGCATCTG
GCGCACGAAG GAACCAGAAC CATCACAGCC TGCACCGAAG CCGACCTGCC GTGCAGCTGT
CTGATGCTCG ACATTGATTT TTTTAAACAG GTCAACGATG CGTGGGGGCA CGATGCGGGA
GACATGGTGC TGCAGTCCGT GGCACGGACC ATCTCGAACG CGGTACGCAG CAAAGACATG
ACCATCCGCA TGGGCGGCGA AGAGTTCGCC GTCATTGCCC CTGCCACCGA CACGGCATCG
GCCTTTTCAC TGGCGGAACG TATCCGCAGA AATATTGAAT CGACCCCCGT TCAGGCTGCC
GACGATGAAA TACGCATAAC CATCAGCATC GGTGTGGCCG ATATGGGCGG GGCACCCATC
TTCGGCACCA CGCAGCTGGA CGACCTGCTG GCAAAAGCCG ACAGGGCCTT GTATCAGGCA
AAGAAAAAAG GCAGAAACAG AACAGAAATC TGGTCTGAAA AACTCATTGC TGCCGCTCCG
GACGGCTGA
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| Protein sequence | MARSQSIASR IRFFSFLLVT LPLCVSLLTF AVVSRILVVG GAHHDMVVEL QHHKLTTERW
LNEQLQSITF FAHTGISDLH DTAALQQALR VFLNYHTSFS QVFYASPDGS LLTGPELPVP
INVGDRGYFQ KARQGLPVVS PVLVSRFSHN PSLIFCAPLP FADGRFAGAV IGVTDLRTLD
EALLRLHRRQ NDQSFLATAD GYLLTSRLQE NTIILPRYNP EGIPVTRTVL PPEDSLSTPH
FYRNTQGVYV LGVRLAFKSG QWLLVQERPV RAMLGGYSWI IAMTMAGALA TAALLIPFLL
KAGRRITGPI EEISTMSEEL THGHYDKECP YLHTADMPPE IRRLYDNFCF MAERVSQQMR
DLEHLSFCDT LTGLHNRRHL AHEGTRTITA CTEADLPCSC LMLDIDFFKQ VNDAWGHDAG
DMVLQSVART ISNAVRSKDM TIRMGGEEFA VIAPATDTAS AFSLAERIRR NIESTPVQAA
DDEIRITISI GVADMGGAPI FGTTQLDDLL AKADRALYQA KKKGRNRTEI WSEKLIAAAP
DG
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