| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0830 |
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| Symbol | |
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| ID | 3755708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 855893 |
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| End bp | 856702 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637781695 |
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| Product | capsular polysaccharide transport protein |
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| Protein accession | YP_387326 |
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| Protein GI | 78355877 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.738185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAGG TACTGCTGTT GTTGGTTGTT GTGCTGCTTT TTGGCGCCGT AGCGGCTCAG
GCCGCGGACG GTGAATACGT CATCGGCAGC GGCGACGGGC TGCTTGTCAA CGTGTGGGGC
GAGCAGGAGC TTAATGTGGC CATAGCAGTC CGGCCGGACG GCATGATAAC CGTGCCCGGC
GTGGGTGAGG TTATGGCGCA GGGCAAAACG CCTCAGCAGC TGACCACAGA ACTGTCGCGC
AAGCTTGCCG AACTGGTACG CAACCCCATT GTAACCGTAA GCGTGACACA GGTGCGCAAC
AATTCGGTCA CGGTGCACGG TGCGGGGGTG CAGGCGGCCG TGGTGCCGCT GGAACGCAGC
ACCACCCTGC TGGAGCTGCT GGCGCAGCTG TCTCCGGGAG ATACGGCAGA CTTTGACAAT
GCCTACCTTT CCCGTCAGGG GCGCAGAATA GTCTCCGGTT TTACCGGCCT GTTTGTAAAA
GGCGAAACGG AAAACGATGT GGCTTTGCAG CCGGGGGACA GAATCTTCAT TCCGTACCGT
GCCGACCGCA ATGTTTTTGT AATGGGCGCG GTGAACAACC CCATGGCCAT TCCTCACCAC
GACGGGCTGA GCGTGCTTGA AGCGCTGCTT GAGGCAGGCA GTTTCAACAA ATTTGCCGAC
AGGAACAATA CAGTGATAGT ACGGCATGAC GGGGTGGAAA AAAAATCCAT TGCCGTGCGC
GGCGGCGATC TGGTGAACGA CGGCGACCTG ACCCAGAATC TGGAATTGCA GCCGGGTGAC
TACGTAATAG TGAAAAAGAG CTTTTTCTAG
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| Protein sequence | MKKVLLLLVV VLLFGAVAAQ AADGEYVIGS GDGLLVNVWG EQELNVAIAV RPDGMITVPG
VGEVMAQGKT PQQLTTELSR KLAELVRNPI VTVSVTQVRN NSVTVHGAGV QAAVVPLERS
TTLLELLAQL SPGDTADFDN AYLSRQGRRI VSGFTGLFVK GETENDVALQ PGDRIFIPYR
ADRNVFVMGA VNNPMAIPHH DGLSVLEALL EAGSFNKFAD RNNTVIVRHD GVEKKSIAVR
GGDLVNDGDL TQNLELQPGD YVIVKKSFF
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