Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0712 |
Symbol | |
ID | 3755824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 730242 |
End bp | 731684 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637781577 |
Product | putative lipoprotein |
Protein accession | YP_387208 |
Protein GI | 78355759 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCCGCCC CTGACCGCCG GTGTGGCACA TATGCCGCAG ACGCTGCCGT CAGCAGATGC CGCGCCCGCC AACGCCATAC TTTCCGCGGA GGTCCCGTGA CGTTTTTTCC GGCCCTGTCC TCTGTATCCC GCCCGCACAA CACCCGCGTC CGCGGCGCAT TATCCTTTGT ACTGACTGTG CTGCTGGTGC TGCTGCCTGC GGCAGGCTGC GACCGCACGC GGGATACCGC GCAAGAAAGC CGCTCCCGCA CAGGCATCTC TGACACGGAA ATACGGTTCG GCTCATCGCT GCCCCTTACC GGCCATGCCA GCTATCTGGG CATACAGACC ATGCGCGGCG CACTCAGCTA TATTAAATAC ATAAATGAAA ACGGTGGCAT ACACGGGCGA CGCATTGTTC TTGATGTACG GGACGACGGG TACGACCCGC CCCGCTGTCT TGCCAACACC CAGAACCTGC TCATAGAAGG CGATGTGTTC GGCCTGTTCT GCTATGTGGG CACCCCCACC ACCGTGCGTG TGCTGCCGCT TATCGAAGAG GCCCGCATCC CGCTGCTGGG CATGTTCACA GGAGCCAACA GACTGCGCCA TCCGTTCAGC CGCTATGTCA TCAATGTGCG CGCCTCGTAT TATCAGGAAA CGGAAGCCGC GGTGCGGCAT CTGGTACAGG ATCTCGGCTT TACGCGCATA GCCGTGTTCT ACCAGTACGA CGATTACGGT TTTGACGGAC TTACGGGTAC GGAACTGGCC CTGCGTGAGC TGGGGCTTGC GCCGGTGGCA CGCGGATCAT ACCAGCGGGG CACACTGGAT GTGAAAGAAG GACTGAACCG CATACTGGCT GCTGATCCTC AGGCAGTTGT CATGGTGGGA ACCTACGAGC CGTGCGCCCG TTTCATCCGC ATGGCCGCAG ATGCCGGCAT GCGCGCCGTG TTCCACACGC TTTCATTTGC CGGTGCCGAA GAACTGGCCC GCCTGCTGCA CGGCGACCAC CGCAATCCCG TGACCATGTC ACAGGTCGTC CCTCCCCCGT CCGCCCCGCA GACACCGGAA CTCATGGCCG ACGCACGGCA ATACACCGAA CTCATGCGCC GCTATTATCC GCAGGACACG CCCTCCATCA TCGGGCTGGA AGGATATGTC AACGCGCGCG TGCTGGTTGA AGCGCTGCGC CTTGCCGGAC GCGGACTGAC GCGCGAATCG TTCATCGACG CCGTGGAATC GCTGCATGCG TTTCCGCTGG GCGGACGCAG CCGCGTAACA TTCAGCAATA CGGACCATCA GGGCATGGAT CAGGTTTACT TCACCCTGCT GCGCAACGGT GAGTTTGTGC TCATCAAGGA CTTTGCTCCG GTAAGGGACC TGCTGCCCCC TGCCGGCGGG CGGCCGGCCG CATCGGCACC GGACACGGCC CGGCAGCACA ATGCCCGCGG AGCACAGTCA TGA
|
Protein sequence | MPAPDRRCGT YAADAAVSRC RARQRHTFRG GPVTFFPALS SVSRPHNTRV RGALSFVLTV LLVLLPAAGC DRTRDTAQES RSRTGISDTE IRFGSSLPLT GHASYLGIQT MRGALSYIKY INENGGIHGR RIVLDVRDDG YDPPRCLANT QNLLIEGDVF GLFCYVGTPT TVRVLPLIEE ARIPLLGMFT GANRLRHPFS RYVINVRASY YQETEAAVRH LVQDLGFTRI AVFYQYDDYG FDGLTGTELA LRELGLAPVA RGSYQRGTLD VKEGLNRILA ADPQAVVMVG TYEPCARFIR MAADAGMRAV FHTLSFAGAE ELARLLHGDH RNPVTMSQVV PPPSAPQTPE LMADARQYTE LMRRYYPQDT PSIIGLEGYV NARVLVEALR LAGRGLTRES FIDAVESLHA FPLGGRSRVT FSNTDHQGMD QVYFTLLRNG EFVLIKDFAP VRDLLPPAGG RPAASAPDTA RQHNARGAQS
|
| |