Gene Dde_0711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0711 
Symbol 
ID3755823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp728137 
End bp730245 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content58% 
IMG OID637781576 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_387207 
Protein GI78355758 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCC TGCTGGAAAA ATTTTCGGCG CTGAGCCTGC AGAACAAATT CTTTTTTTCC 
ATTCTCGCGG TCATCATGAT CATCAGCGGC ACCATTGCGC TGCTGGCACG CTGGATTCTG
GTATCCAGCC TGACCACCGA ACTGGAACTG CGGGGTACGG CCGTGGCCCA CAGCGTTGCA
GCCCGCGGTG CAAGCCATAT TCTGGACAAC GACCGGCCGC AGCTGCTGAA CCTGATATTT
GACGAAGCCC AGCTGCGCGA ACGCCAGCAG CTGGTGGCCT ATATCTTTGT GCAGGACAAA
GACAACACCG TGCTGGGGCA CACGCTGGTA CGTCCGCTGC CCCCCCAGCT TGCCGGAGCA
AATCCCCTGC CTGCAGGAGT CAGCCGCAGT GTGAAAGTGG TATCGGTGCA CGGCGAACCG
GCCTACGACA TCGCCGTACC CATCTACGAG GGGCTGTACC GTATCGGTAC CGTCCACGTG
GGGCTCAGCA AAGATCACAT CGACCGCCTT GTGGGCAAAC TGCGCATCAC TTTTCTCGGA
TTCATCTCCG CAGTCATCGT GATCATTTTT CTTATCAGTC ACAGGCTGTC ACGGTACATC
ACCGCGCCCG TGGTGCAGCT TACCCGCATT TCCGATGATC TTTCGCGGGG TAATTTTCAG
TCTGCGGGCA CGCTGGACGG CGCCGGCTCC GGCTGGACCA TAACCGACTG CCCTGCCTAT
GACGATACGG ACCTGCCGTG CTGGCATTTT GACGAGCAGA TGAAAAGCCA CATGTCGCCG
GAATCACTGC ACCGCTGCAA GACTTGCGTT TTTTACCGCA AACGCAAAGG AGATGAGGTG
CTGCAGCTCA CTGACTCATT CCGCAACATG GTCTGGTCCA TCAAGCTGTA CCGGCAGCGG
CTGCAGGAAT CGGAAGGCAA ATACCGGTCA CTGTTCGACA GCGGTCCGGA CCCCATATTT
GTGGTGGACT GCACCAGCCA CACCATACTG GACGCCAACC CCAGAGCCGA AGAAGTATAC
GGCTACGGAC GGGGGGAATT GACCGGTACA TCGTTTCTGG AAGTCGGCCC CGACCCCAAC
AGGGAATGTC TGGCCGTGTT CGAGCAGGGC GGCGAAGCGG AATCGGCCAC AGGGTGTCTG
TATTTCAGCA AGGTTGTGCA CTACCGCAAA GGCAAGGTTC CGTTTTATGT AAACATGCAT
GCCTGTCCCA TAGGATACAG GGGCAGACCG GCCATCATAG TGGCCACCAC CGACATCACC
GACATGATGG AAAAGGATGC CCAGCTGGTA CAGGCATCCA AAATGAAATC ACTGGGTGAA
ATGAGTGCCG GCGTGGCGCA TGAACTCAAC CAGCCGCTGA ACGCCATACG CATGGGCAGC
GATTATCTTG CCATGGTTTT TTCATCGCTG CCGCAGAACA ACGAAGGTCA CATATGCATT
TCCGCCGGTC ATGCACGCGA AGTGCTGGAA GAAATAGGCG CTCAGGTGGA CAGGGCCACG
GAAATCATCA ACACCCTGCG CTCGTTCAGC CGCAAGGCGG ATTTTCTGGC TGCCCCCATC
GACATCAATG CTCCGGTGCG TGCCGTTGTT TCGCTGGCCG AAAGGCAGTT TCAGCTGCAG
AACATCACCA TCCTGCTGGA CCTGCAGGAA AACCTGCCGC CCGTACAGGC ACATGACAAC
CGTCTGCAGC AGGTTTTTTT CAACCTCATA TCCAACGCGC GCGACGCCAT TCAGGAACGC
CGGCGCTCGC AGGAAAAACC CACCGACGGA CGCATTGTCA TCACATCGCG TGCAGCGGAA
CAGCAGGTGG TTCTTTCATT CAGCGACAAC GGCTGCGGCT TTCCCGAGGC CATGCGCGAC
AAGGTTTTCG AGCCGTTTTT CACCACCAAG GCCACAGGAC AGGGCATGGG GCTGGGGCTG
GCCATAAGCT ACGGCATAGT GCGCGATTAC GGCGGGCAGA TACGTGCGGA GAGCAAAACA
GGAGAAGGCA CAACTTTTCA TCTGGGTTTT CCCGTGCACG ACCCCCGCGG AGCAACCCAT
ACATCCAGGG CGGCAACGGC CCGCGGCGGC ACACAGACAG AACGTGACAC ACCGGAAAAC
GGTGCATAA
 
Protein sequence
MNRLLEKFSA LSLQNKFFFS ILAVIMIISG TIALLARWIL VSSLTTELEL RGTAVAHSVA 
ARGASHILDN DRPQLLNLIF DEAQLRERQQ LVAYIFVQDK DNTVLGHTLV RPLPPQLAGA
NPLPAGVSRS VKVVSVHGEP AYDIAVPIYE GLYRIGTVHV GLSKDHIDRL VGKLRITFLG
FISAVIVIIF LISHRLSRYI TAPVVQLTRI SDDLSRGNFQ SAGTLDGAGS GWTITDCPAY
DDTDLPCWHF DEQMKSHMSP ESLHRCKTCV FYRKRKGDEV LQLTDSFRNM VWSIKLYRQR
LQESEGKYRS LFDSGPDPIF VVDCTSHTIL DANPRAEEVY GYGRGELTGT SFLEVGPDPN
RECLAVFEQG GEAESATGCL YFSKVVHYRK GKVPFYVNMH ACPIGYRGRP AIIVATTDIT
DMMEKDAQLV QASKMKSLGE MSAGVAHELN QPLNAIRMGS DYLAMVFSSL PQNNEGHICI
SAGHAREVLE EIGAQVDRAT EIINTLRSFS RKADFLAAPI DINAPVRAVV SLAERQFQLQ
NITILLDLQE NLPPVQAHDN RLQQVFFNLI SNARDAIQER RRSQEKPTDG RIVITSRAAE
QQVVLSFSDN GCGFPEAMRD KVFEPFFTTK ATGQGMGLGL AISYGIVRDY GGQIRAESKT
GEGTTFHLGF PVHDPRGATH TSRAATARGG TQTERDTPEN GA