| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0693 |
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| Symbol | |
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| ID | 3755843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 706666 |
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| End bp | 708489 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637781558 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_387189 |
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| Protein GI | 78355740 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00166729 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCAA CCTTCATGTC CCCGCAGGTG CTCGCCGTCA CGGCAATTCT GATTCTGGCC
CTGTACTTCC TTGTCACGGA AAAATGGCCC CTGCCGCTCA CCGCTCTGGG CATCATCGTC
GGTCTGTGTC TTGCCGAGGC GCTGGTAGGC GGCATCCTGT CCTTCAGCAA TATTTTCGGT
TCGTTCGGCA GCCGCGGTCC TCTGGCGGTG GCCATGCTGT TCATTGTCAG CCGGGGGCTC
ATACGCTCCG GGGCACTGTC ATTCGTGGTC AATCTGGCCG CGCGGCTTAC AGGCGGCAAA
CCGCTGCGGC TGATGATATT CATGGTCACC ACGGTCATCA CGCTGTCCGC ATTCCTGAAC
AACACCCCCG TGGTCATTCT GTTCATCTCC ATCATCCTCA TGCTGTGCGA ACGCTTCCGC
CTCGTACCCT CCAAGTTCAT GATCCCGCTG TCCTTCGCGT CCATTCTGGG CGGCACGTGT
ACGCTTATCG GTACTTCCAC CAACATCATT CTTTCCGACA TGATGGTGCT GAACAAGCAG
GCCCCGCTGG GCATGTTCGA ACTGGCCGTG GTAGGTGTGC CGCTGGCCAT CATCGGCGGG
CTGTTCCTTA TATTTGTGGC TCCGCGGCTG CTGCCGGAAC GCAAGTCGAC ATTCATCTCC
AGCGGCGAAC AGCAGGAAAA CCTGTACCTT TCCGAAGTGG TGGTGCCCGA AGGCAGCCCG
CTGGCGGGGG TGAAAATAAG CGAAGCCTCC TCTGTACTGG GCAGTTCGGG CAGTGTTGTG
GAACAGAGCA GACAGGGTGA AATGCTTTAT CTGCCCGGCA GGGAGGATCA GATTATATAC
GCGGGCGACC TGCTTGTGGT CAGCAGCCCG CTGGATACTC TGACATCGCT GCTTGCCAGC
CGCATCATCG TGCTGCGCCA CGGCGGCGAC CTGTTCCTTT CCGGCCCCAG CGACGCGCGC
CCCATAGCGG AACTTATCGT ACCGCCCGCA TCGCGGGTAC GCGGCCGCAG GCTTTGGAAC
ACCGCCCCCG GGCGCGACGA AAACATCACA GTTATCGGCG TACGCCACAA GGAAGGGCAC
TACGCATGGC AGAAGACCAG CCAGCTGCGA CTGGCAGCCG GTGACACCCT GCTGGTACAG
GGCACCCGCG CAGCCATGGA CTCGCTGGCA TCGGACGGCG ATTTCATCAT CATGGAAGAA
GCCGGTCAGA AGATTCACTA CTCCAACAAG GCACCTCTGG CGCTGGGCCT GTTCCTTGCC
ATGGTTGTGG TTGCCTCTGT GGGCATCATG GGCATTCTGC CCGCGGCCAC CATCGCGGCT
TTCCTTATGA TTCTCACACG CTGCGTCAAC CTGAAGGAAA GCTTCCGTTC GCTGGACGGT
GAAGTGCTGC TGCTCATCAT CGCCACCATA TCGCTGGGCA AGGCCCTTTC GCAGACAGGT
GCGGCAGATG TTTACGCCCA CGCCTTCCTT ACCCCCTTTG AAGGCGTATC GGCGCGGTTC
ATCCTTCTGG CCGTAGTCAC ACTGACCGCG CTTATCACCA ACTTTCTTTC CAACAACTCG
GCTGCGGCGC TGCTTACACC CGTTGCCGTT TCCATAGGTA TGGAGCTGGG AGTCGACCCC
CGCGCGTTTC TTATAGGCAT CGCTCTGGGT GCATCGGCAT GCTATCTGAC GCCCATCGGC
TATCAGACCA ACCTGCTGGT ATACGCCCCC GGCGGCTACA AGTTTTCGGA CTTCATGCGC
GTGGGGCTGC CCATGACCCT GCTGGTCATC GTGCTGGCCA CTGTCATGAT TCCCATGTTC
TTCCCCTTTA CGCCCCTGCA GTAG
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| Protein sequence | MEATFMSPQV LAVTAILILA LYFLVTEKWP LPLTALGIIV GLCLAEALVG GILSFSNIFG
SFGSRGPLAV AMLFIVSRGL IRSGALSFVV NLAARLTGGK PLRLMIFMVT TVITLSAFLN
NTPVVILFIS IILMLCERFR LVPSKFMIPL SFASILGGTC TLIGTSTNII LSDMMVLNKQ
APLGMFELAV VGVPLAIIGG LFLIFVAPRL LPERKSTFIS SGEQQENLYL SEVVVPEGSP
LAGVKISEAS SVLGSSGSVV EQSRQGEMLY LPGREDQIIY AGDLLVVSSP LDTLTSLLAS
RIIVLRHGGD LFLSGPSDAR PIAELIVPPA SRVRGRRLWN TAPGRDENIT VIGVRHKEGH
YAWQKTSQLR LAAGDTLLVQ GTRAAMDSLA SDGDFIIMEE AGQKIHYSNK APLALGLFLA
MVVVASVGIM GILPAATIAA FLMILTRCVN LKESFRSLDG EVLLLIIATI SLGKALSQTG
AADVYAHAFL TPFEGVSARF ILLAVVTLTA LITNFLSNNS AAALLTPVAV SIGMELGVDP
RAFLIGIALG ASACYLTPIG YQTNLLVYAP GGYKFSDFMR VGLPMTLLVI VLATVMIPMF
FPFTPLQ
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