Gene Dde_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0556 
Symbol 
ID3756465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp578103 
End bp578672 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content56% 
IMG OID637781417 
ProductMerR family transcriptional regulator 
Protein accessionYP_387052 
Protein GI78355603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCAA AAAAACTGGG AGCGCGCATC TGTAAGTTCC GCGAGGAGCG GGGGATGACG 
CGTGAAGAAC TGGCAGAGGC CGCCGGCCTC GGAGCCGACT TTATCACGGC GCTGGAAGAA 
GAGGATCTTT ATCCTTCCAT CGGCCCGCTG CAGAAGATTG CCCGCGCCCT TAACGTGCGT 
CTGGGCACGT TTATGGATGA TGAAGTGACC CGCGACCCCA TTGTGGTGCG CAAAAGCGGG 
CGTGAAAGCG ACCTGACCAT GCAGAAGGCA CGGAACAAAC GCGCCGCGTT CATGTTTCAT 
TCGCTGGGCA AGGGAAAAAG CGACCGCAAC ATGGAACCTT TTTTCATTGA GATAGCTCCG 
GAACCCAACG AAGACAGGCA GCTCTCTTCG CATCAGGGCG AGGAGTTCAT TGTTGTCGTT 
TCGGGCAGCA TTCTTGTGCG CTACGGCAAT GAAGAGCATG TTCTGGAACA GGGCGACAGC 
ATTTACTACA ACTCTATCGT GCCGCACTAT GTGGGCGCGG CGGGTGACGA CAAGGCGGAA 
ATATACGCCG TTATCTATTA CCCGCGCTAG
 
Protein sequence
MAAKKLGARI CKFREERGMT REELAEAAGL GADFITALEE EDLYPSIGPL QKIARALNVR 
LGTFMDDEVT RDPIVVRKSG RESDLTMQKA RNKRAAFMFH SLGKGKSDRN MEPFFIEIAP 
EPNEDRQLSS HQGEEFIVVV SGSILVRYGN EEHVLEQGDS IYYNSIVPHY VGAAGDDKAE 
IYAVIYYPR