| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0555 |
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| Symbol | |
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| ID | 3756464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 575543 |
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| End bp | 577876 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637781416 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_387051 |
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| Protein GI | 78355602 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCAG CAACAATCCG CAGAAAATAC GTCATCTCCG GACAGGTACA GGGTGTCGGC
TTCCGGCCCT TTGTCTTCCG CATCGCCCGC GATCACGGCA TCACGGGCAC GGTGTCCAAC
ACCTCGCAGG GAGTATTCAT CGAAGCACAG GGCACGCCGC AGGCCGTTGC CGCATTCGGT
ACCGACCTGA CGGACAAGCT GCCGCCGCTG GCGCGGGTTG TGTCGCGCAC GGAAGAAGAT
ATCCCCCCCC GTGAAGACGA GCAGCTGTTC ACCATTGTGG CCAGCGAAGG GGGCAGCGGG
CAGAATGTGC TCATCAGCGC GGACGTGGCC ACCTGTCAGG ACTGTCTGCG CGATATGTTC
GACCCGTCGG ACAGACGTTA CCTGTATCCC TTTACCAACT GTACCAACTG CGGCCCGCGT
TACACCATTA CGCGGGCCAT TCCGTATGAC AGAGACAAAA CGTCCATGGC GTGTTTTCCG
CTGTGCCCTC AATGCCGCGA AGAATACGAA AACCCCATGG ACAGAAGATT CCACGCCCAG
CCCAACGCCT GTCCGAAATG CGGCCCGCAT GTGTGGCTTG CCTCGGCGGA CGGCACGCAA
CTGGCCCGCG ACACGGAAGC TGTTGTCCAG ACGGCAAAGG CACTGGCCAA AGGCCATATT
GCCGCCATCA AAGGGCTGGG GGGCTTTCAT CTGGCATGCG ACGCCACCGC CACCGCAGCG
GTGGACAGGT TGCGCGCACG CAAAAAAAGA CCCGGCAAAC CGCTGGCCGT CATGGTGCCC
GACATGGCAG CAGCTCAGGC TCTGGCCCAC ATCGGCAGCG GCGAAGCGGC CCTGCTGCAG
TCAGTGGAAC GCCCCATTGT GCTGTGCCGG CTAAAACAGG GCACCCCGCT GGCTCCGCAG
GTCAGCCCCC ATACGGACCA TGTGGGGCTT ATGCTGCCTT ATACGCCGCT GCACCATGTA
CTTTTTCATC TGTACCGCGA AATTCTGCCG CATGAAGCCT GCGCCGCGCT GGTCATGACT
TCCGGCAACA TGAGCAGCGA ACCCATCAGT CTGGGAAACA GGGAAGCGCT GCTGCGCCTG
CACGACATTG CCGATATTTT TCTGCTGCAC AACCGCGACA TTCTCATCCG CACCGACGAC
TCCGTGGTGC GCGTCAACCC CGACACGCAC GAACCGCAGT TTCTGCGCAG AGCCCGCGGC
TACACCCCCC GCCCTGTCTT TCTGGACGGT GAAGGGCCGT GCGTCATGGC CACCGGTCCC
GAGCTGAAAA GCACCCTTTG CTACACGCGG GGTGATCAGG CTTTTGTCAG CCAGCACATA
GGCGATCTGC AGAACCTTGA ATCGTTCGGA TTTTACCGTG AAATCGCACG GCACCTGCAG
TCCGTGCTGG AAGTGACTCC GCAGGCGGTG GTGCACGATC TGCATCCCGA CTACCTGACC
ACCAGCTATG CCGAAGGCCG CGCGCAGCGC GACGGCATTC CCGCGCTGAG TCTGCAGCAC
CATTATGCGC ACATATACAG CGTACTGGCA GAAAACAGAT TTTCCGGGCC GGTGCTGGGC
ATTGCGCTGG ACGGCACAGG ATACGGCGAA GACGGTACCA TATGGGGCGG AGAACTGCTG
TATGTAGACA ACAGCCGGCT GGACCATGAA CGGCTGGGAC ATCTTGCCCC CATGCTGCTG
CCCGGCGGCG AGGCCGCCAT ACGTGAGCCC TGGCGCATCG CACAGGGAAT ACTGTGGCAG
AACGGCACAA CCGGCCCCGG AGACATACCC TGGCCGTGGC AGGAGCAGTT CAGAGATGCG
GCGCGCGTTC TGCCGCAGGT CATGGAGCGC AGACTGAACA CTCCGCTGAC AAGCAGTTGC
GGGCGTCTGT TCGACGCGGT ATCCGCCATG CTGGGCATAT GTATTTCAGT CACATACGAA
GGACAGGCGG CCATAATGCT GGAGCGCATA CAGGACATGG GCGTGACAGC CCCCTACCCA
TGCCCCATGC GTACCGATGT GCAGCCGCTG ATGCTCGACA CACACGCCCT GTTCATGGCC
GCATATGCCG ACTGGCTGCA AAATGTTCCC GCAGGTGTCA TCAGCCGCCG CTTCCATCTG
GGTCTCATGC ATGGTCTGGC AGAAGCCGCC GGCAGTCTGG CGGAAGTCAT GGACATTGCC
ACGGTGGGGC TTTCCGGCGG CGTGATGCAG AACAGAACCA TAAGCGCCGA ACTGCCGCCG
CTGCTGCGCC GTCGCGGGCT CTCTGTACTG GTGCACCGTG AACTGCCGCC CGGCGACGGC
TGCATTTCGC TGGGACAGGC AGACTGGGGC CGCCGCATGC TGATGCAGCA GTAA
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| Protein sequence | MAAATIRRKY VISGQVQGVG FRPFVFRIAR DHGITGTVSN TSQGVFIEAQ GTPQAVAAFG
TDLTDKLPPL ARVVSRTEED IPPREDEQLF TIVASEGGSG QNVLISADVA TCQDCLRDMF
DPSDRRYLYP FTNCTNCGPR YTITRAIPYD RDKTSMACFP LCPQCREEYE NPMDRRFHAQ
PNACPKCGPH VWLASADGTQ LARDTEAVVQ TAKALAKGHI AAIKGLGGFH LACDATATAA
VDRLRARKKR PGKPLAVMVP DMAAAQALAH IGSGEAALLQ SVERPIVLCR LKQGTPLAPQ
VSPHTDHVGL MLPYTPLHHV LFHLYREILP HEACAALVMT SGNMSSEPIS LGNREALLRL
HDIADIFLLH NRDILIRTDD SVVRVNPDTH EPQFLRRARG YTPRPVFLDG EGPCVMATGP
ELKSTLCYTR GDQAFVSQHI GDLQNLESFG FYREIARHLQ SVLEVTPQAV VHDLHPDYLT
TSYAEGRAQR DGIPALSLQH HYAHIYSVLA ENRFSGPVLG IALDGTGYGE DGTIWGGELL
YVDNSRLDHE RLGHLAPMLL PGGEAAIREP WRIAQGILWQ NGTTGPGDIP WPWQEQFRDA
ARVLPQVMER RLNTPLTSSC GRLFDAVSAM LGICISVTYE GQAAIMLERI QDMGVTAPYP
CPMRTDVQPL MLDTHALFMA AYADWLQNVP AGVISRRFHL GLMHGLAEAA GSLAEVMDIA
TVGLSGGVMQ NRTISAELPP LLRRRGLSVL VHRELPPGDG CISLGQADWG RRMLMQQ
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