| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0536 |
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| Symbol | |
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| ID | 3756482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 545682 |
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| End bp | 547418 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637781396 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_387032 |
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| Protein GI | 78355583 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.448786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCAC TGCTACAGGA TACGGCTCGA ACGGGCCGTA TCCGTAGCCC GCAGAGGCGG
GTTCGACATG GTTACCTCCA CCCTGCTGTA TTCCCGCAAA CAGCAGCACG AGCGCATCGC
CGCGCTGGGC AGCGACCTGT GCGGCGACGG CAGGCTGCGT TTTCTGTACC GCGACTTCCG
GGAAGGCTGG CAGCAGGGCA TAGAGACTTC CAAAGCGTGG GGCATATACC GGCAGCAGTA
CTGCGGCTGC CTGTACAGCG AAACCGAACG GTACGCCCGC GAACTGAAAA ACGCCGGTGC
GCAGGTGCCG CAACAGACCG CCGGCACGCC CTGCTGCGCA GAAGGTACAG AAAAACAGGC
AGAACAGGCC GACGCCACCC CCGCAGCCGA CAATGCAGGC AGATAAGACA TACTGTGCCG
CAACGCGGCG CGGCACACGC CGCATGCGCT GACCGCAACC GCCCGCAGCC CGCGCGGTAT
CCGCAACCAC CGGGCGGCGA AGCAGAAAGA CAGACCCGCG CGGCCGTTCA CCGCCGGACA
TCCGGAGCCT TTGTGCTGCT GTATATTCAT GTGCCCTTCT GCCGCAGCAA ATGCGGCTAC
TGCGCTTTCC ATTCCGTCCC TGTGGCCGCC GCGGGACCGG ACGGCATGCA ACAGTATCTT
GATGCGCTGC TGCGCGAGAT AGCCCTGTGG GGCGACCGGC TGGGTAACAG AGCGGTGCAT
ACCGTTTTTT TCGGCGGGGG CACGCCCAGT CTGCTGCCGG AAAAAGCGGT GGCCGTCATC
ATGGACAGGC TGCGACGCGC GTTCGACATA CAGAACGGGG CCGAAATCAG CTTTGAGGCA
AATCCCGAAT CCGTCTCCGC CTACGGGTAT CTTGACACCC TTTTCAAATG CGGCATCAAC
AGACTGAGCC TGGGAGTGCA GAGCCTGAAC AACGACGGTC TGCGCGTACT GGGGCGGCCC
CACAAGGCGC GCGAAGCCGT AAATGCCTTC CGTCTGGCGC GTCAGGCAGG CTTTGGCAAC
ATCAATCTGG ACATGATATG GGGGCTGCCA TCGCAGCGGC TCAAGCTGTG GCTTGACGAG
CTGAAAGCAG TAACAGAGCT CAAGCCCGAC CATCTGTCAT GCTACGGACT CACGCTGGAA
GAAGGTACCC CGCTGGAACA GGCATGTCTG CAGGGGCGGC ACACACTGCC CGACGAGCAG
GAACAGGCCC GCATGTTCAT CTACGGTGCG GAATTTCTGG AATCGCGGGG CTATATGCAG
TACGAAATTT CCAACTTCGC CCGCATGGGA TTTCAGTGCA GGCACAATCT GGGCTACTGG
GAAGGCGCCG AATATCTGGG CATGGGGCCT TCGGCGGTTT CCACGCTGTC CGGCAGACGC
TGGGAAAACC CGCACGGGCT GCAGGAGTAT GCCCGCCGCA CAGCCGAGGG TACGCTGGGG
CACGATGCCG CGGCACTCAC CCCGCTGGAG CGGGCCGAAG AACTTATCAT GCTGCGTCTG
CGCACGGCAC GCGGCCTGCG CGTGAAAGCA TACCGCGACC TTACCGGACG CGATTTTCTG
CGCGAGCACA AACAGCTGGT GCACGCCCTG CACCGCAACA GGCTGGTACG CATCAGCAAC
GGGTATCTGC GCTTGACCAG AAACGGCATG CTGGTATCGA ATACCATTCT GGAAAACATC
TTTGCCACTC TGCCCGAAGA AACGCCGCAC AAGCTGTCCG CAGCACAGGA ACCGTAG
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| Protein sequence | MLSLLQDTAR TGRIRSPQRR VRHGYLHPAV FPQTAARAHR RAGQRPVRRR QAAFSVPRLP
GRLAAGHRDF QSVGHIPAAV LRLPVQRNRT VRPRTEKRRC AGAATDRRHA LLRRRYRKTG
RTGRRHPRSR QCRQIRHTVP QRGAAHAACA DRNRPQPARY PQPPGGEAER QTRAAVHRRT
SGAFVLLYIH VPFCRSKCGY CAFHSVPVAA AGPDGMQQYL DALLREIALW GDRLGNRAVH
TVFFGGGTPS LLPEKAVAVI MDRLRRAFDI QNGAEISFEA NPESVSAYGY LDTLFKCGIN
RLSLGVQSLN NDGLRVLGRP HKAREAVNAF RLARQAGFGN INLDMIWGLP SQRLKLWLDE
LKAVTELKPD HLSCYGLTLE EGTPLEQACL QGRHTLPDEQ EQARMFIYGA EFLESRGYMQ
YEISNFARMG FQCRHNLGYW EGAEYLGMGP SAVSTLSGRR WENPHGLQEY ARRTAEGTLG
HDAAALTPLE RAEELIMLRL RTARGLRVKA YRDLTGRDFL REHKQLVHAL HRNRLVRISN
GYLRLTRNGM LVSNTILENI FATLPEETPH KLSAAQEP
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