Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0453 |
Symbol | |
ID | 3756268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 462665 |
End bp | 464062 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637781313 |
Product | biopolymer transport proteins-like |
Protein accession | YP_386949 |
Protein GI | 78355500 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.204978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCGTT TGTTAACGGC AGTGATGCTG GTGGTGCTGG CCGCATGGCC TGTATACGGC GCCGAAAGGC AGGAAAAACC CGTACTCGGG CGCGTGGCCG AGGATGTTTC GCAGATGCGG CGCGAGACTG TGGAAAATGT GGAGGAGGTC CGGCGCTCCA TAGACGCGCA GCGCAAAGAG CTGAAGGAAA CCCTGCAGCG TGTGAAGCGC GATGCCGCGG CAGCGCGTGA ACATGCCGGA AGGCTGGAGA CCGAACTGGC CGGCCTGAGA GCCCGCGAAG CCGAACTGAC CGCTGAACTG GGCGGCAGGC AGGAGGCCAT GCGCAAAATA CGCAGTGCCG TGCGCGACAA TGCTGCCCTG CTGCTGGAAT CCGGCCCCAT ATATGATGTT CCCGGCATGG CGGAAGGCTG GCGCGGTACG CTGGAGGGCA TGACCGCTCC GGAACATTTT CCTTCGCTGG AGGAAGTCAG ACTGCTGCTG CACTCCATGC TGCTGTCCGT GGAGGCGGGA GGCCGCATGG CCTTGGTGCG GCAGCCTGTG CATATCCGCG ACGGCAGTCT GGTTGAAGCG CAGGTGCTGC ATTATGGCGC GTTTCAGGCT GCATATGCCG CGGGTGACGA AACAGGTTTT CTTACAAGAG TGCGCGGTGC TGATGCGCCT CAGGCTTTTG CCTACCGGCC GGACAGTGCC GAGTCCGGCA TGATTGCGCA GGCCGTGAGC GGTACCGGAA AAGGGCCGGT ACCTCTGCCA GCGGATGTCA CCGGCGGCAG AGTTCTGGCT GACCCCCCTG CGCGGCATAC CATGCTGACG GCTGTCATGG ACGGCGGCAT GTTTCTGTGG CCCATCATGC TCATAGGCGT GGTGGGACTG CTGCTGGTGG CAGAGCGGTG CGTGACGCTG GGCAGGGTGC GTGCCAACGG CAGGCAGGCC GTGGAGCAGG TGCTGCACGG GGACCGGAAC ATGACTGCAC AGGCCGGGCG TACTCCGGCG GAACGAGTGG TCCGGCGTAT GTGCACGCCG GGCGGCACAC CGGATGATGC CGAACAGATG GAGCGCCGTC TGGAACAGGC GGTGCTTGAA GAACTGCCGC CCCTTGAGCG TTTTCTGCAG ACCATACGCG TGCTTGCCGC CATATCTCCT CTGCTTGGTC TGCTGGGTAC GGTGTCAGGC ATCATCCAGA CGTTCCGGAT TATCACGGCG CACGGCAACG GCGATCCCAA GCTGCTTTCC GCAGGGATAT CCGAAGCGTT GCTCACAACG GAGGCGGGCC TTCTGGTGGC CATTCCCCTG CTGCTCTGCC ACCATTTTCT GACCCGCAGA GTCAATACGG TGATGCTGGA CATGGAAGCC GCCGGAACAT CGCTCATCGC GGCGGGGAGC AGCGGGAGGC AGCAATGA
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Protein sequence | MRRLLTAVML VVLAAWPVYG AERQEKPVLG RVAEDVSQMR RETVENVEEV RRSIDAQRKE LKETLQRVKR DAAAAREHAG RLETELAGLR AREAELTAEL GGRQEAMRKI RSAVRDNAAL LLESGPIYDV PGMAEGWRGT LEGMTAPEHF PSLEEVRLLL HSMLLSVEAG GRMALVRQPV HIRDGSLVEA QVLHYGAFQA AYAAGDETGF LTRVRGADAP QAFAYRPDSA ESGMIAQAVS GTGKGPVPLP ADVTGGRVLA DPPARHTMLT AVMDGGMFLW PIMLIGVVGL LLVAERCVTL GRVRANGRQA VEQVLHGDRN MTAQAGRTPA ERVVRRMCTP GGTPDDAEQM ERRLEQAVLE ELPPLERFLQ TIRVLAAISP LLGLLGTVSG IIQTFRIITA HGNGDPKLLS AGISEALLTT EAGLLVAIPL LLCHHFLTRR VNTVMLDMEA AGTSLIAAGS SGRQQ
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