Gene Dde_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0342 
Symbol 
ID3756352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp332321 
End bp332983 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID637781202 
Productprecorrin-8X methylmutase 
Protein accessionYP_386838 
Protein GI78355389 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2082] Precorrin isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.470855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACCC CCGTTCTTCA GCAATGCTTC GCACCTCAGG CCATCGAGGC GCGCTCCTTT 
GCCATTATCG ATTCGGAAGT GCCCGAGCCG CGCCCCTTCT GCGGTGCCCA CTGGCACATA 
GCGCGCAGAC TGGTGCATAC CACCGCCGAT TTTGACCTGC TGAACCACAT ACGGTTTCAT 
CCGCAGGCAG TGGAGGCGGG TATACGCGCC CTGCAAAACG GCTGCACCAT ATTCACAGAC 
ACGGAGATGG CCCGCTCCGG CATACCCCTG CGCCGCATGA CACCGCTGGG CTGCACGGTA 
ACGTGTCTGC TGAACCGCCC CGATGTGGTA CACGCGGCGC AGCGCGACAA CACAACCCGC 
GCCCATGCCG CCATGAACGC CGCCAGCAGC GAACTGGCGG GAGCCATAGT GGCCATAGGC 
AACGCACCCA CGGCGCTCAT CCGGCTGGCC GGACATCTGG AACAGGGCTG CCCTGCGCCC 
GCACTGGTCA TCGCCATGCC CGTGGGCTTT GTAAACGCGG CGGAATCCAA GGCGCTGTTC 
ATACAGCAAA ACCGTGTACC ATGGATTACC ATAGAGGGCA GAAAAGGCGG GTCTGCACTG 
GCGGCAGCCA CCGTGAACGC ACTGGCCGTG ATGGCGCTGG AATCTTCACC CGCCGCCCCG 
TGA
 
Protein sequence
MDTPVLQQCF APQAIEARSF AIIDSEVPEP RPFCGAHWHI ARRLVHTTAD FDLLNHIRFH 
PQAVEAGIRA LQNGCTIFTD TEMARSGIPL RRMTPLGCTV TCLLNRPDVV HAAQRDNTTR 
AHAAMNAASS ELAGAIVAIG NAPTALIRLA GHLEQGCPAP ALVIAMPVGF VNAAESKALF 
IQQNRVPWIT IEGRKGGSAL AAATVNALAV MALESSPAAP