Gene Dde_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0339 
Symbol 
ID3756388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp328534 
End bp329763 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content56% 
IMG OID637781199 
ProductOMPP1/FadL/TodX family outer membrane protein 
Protein accessionYP_386835 
Protein GI78355386 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.746595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGACGGT TCTTCATAGT CTGTTGTCTC GCTCTTTCGG GCATGTTTCT CAGCCTTCCG 
CACACGGCCC GGGCCGCAGG ATTTGCCATG TACGAATTCA GCGCCCGCGG CAATGCTCTG
GGCGGCGCCA TGGTTGCGCG CAAGGCCAGT CCTTCTTCCA TTGCGTTCAA CCCTGCGCTG
ATTACGCAGC TTAAGGGTAC TCAGATGGCT GCGGGCATGA CGCTGGTAGA CCCCAGCGCC
ACTGTGGAAG TGAAAGGGCA GGAAACTGTC TCCGCCAAAA AGAATTACTG GGCCATTCCT
CATGCCTACG CCACGCGGCA GGTCAACGAT GCGCTGTACT ACGGTGTCGG CGTGTTTTCC
CGTTTCGGTC TGGGTAATGA ATATTCCAAA GACTGGTTCG GTAAAGACCA GCTGTATTAT
GTGGGCATAC AGTCCCTGTC GGTGAACCCC GTCATGGGGC TTAAACTTAC CGACAAGCTT
TCGGTCGCCT TTGGCATTGA GGCCATGTGG TTTGACTATG AGCAGAAAAA CATAGTGGAA
GCCGGTGCCG GCGGCAGGCT GGACGGCCGT GTGAACGGCG AAAGCATAGG CTACGGCATT
AATCTGGGCA TTCACTATCA GCCTGTGGAA TGGCTTGCGC TGGGCGCCAG CTGGCGTTCC
GGCATCAAGC AGAACCTGAA GGGCACGGGC TATTTCAGCG GTTCCGGCCC CCTTTTCAGC
AACTGGGGCG ATACCGATGC GCGCGGCAGC GTGAACCTGC CCGACATGCT TTTTCTGGGG
GTATGTGTGA TGCCCACCGA CAGGCTGAGC ATTGAAGCGG GTGCGGTACG TACCGGCTGG
ACAAGCTATG ACAAGCTGGT CATCGATTAT AACAACCCCA GTGTGGCAAC GACGGACAAA
ACCACCGAGT GGAAGGATGT CTGGCGGTTT AACGTGGGGG TTGAATATGC CCTTAACGAG
ATGCTGGACC TGCGTGCCGG CTATGTTTAT GACAATTCGC CGCTCAACGA AAACTATCTT
GATTTTCTGG TGCCTGCCAA CGACAGGCAT CTTTTCAGCG GCGGTGTGGG CATACATCAG
GGGCCGTGGA CGCTGGACCT CAGCTACACC TACCTGCTTA TCAAGGAACG CACAGGCAGT
GTGACCACCA CAATGGGCGG TGAAAACAGA GTGCGCTTCA AAGACGGAGA CGCTCACCTT
GTGGGCATGA CGCTGGGATA CCGCTTTTAG
 
Protein sequence
MRRFFIVCCL ALSGMFLSLP HTARAAGFAM YEFSARGNAL GGAMVARKAS PSSIAFNPAL 
ITQLKGTQMA AGMTLVDPSA TVEVKGQETV SAKKNYWAIP HAYATRQVND ALYYGVGVFS
RFGLGNEYSK DWFGKDQLYY VGIQSLSVNP VMGLKLTDKL SVAFGIEAMW FDYEQKNIVE
AGAGGRLDGR VNGESIGYGI NLGIHYQPVE WLALGASWRS GIKQNLKGTG YFSGSGPLFS
NWGDTDARGS VNLPDMLFLG VCVMPTDRLS IEAGAVRTGW TSYDKLVIDY NNPSVATTDK
TTEWKDVWRF NVGVEYALNE MLDLRAGYVY DNSPLNENYL DFLVPANDRH LFSGGVGIHQ
GPWTLDLSYT YLLIKERTGS VTTTMGGENR VRFKDGDAHL VGMTLGYRF