Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0272 |
Symbol | |
ID | 3755290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 262838 |
End bp | 263797 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637781132 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
Protein accession | YP_386768 |
Protein GI | 78355319 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACGC TGCTTGAAGT CAAAAACATG ACCGTCCAGT TCGCCATGCG CGACACGCAG CTCACAGCGG TCGACAATGT TTCGTTTTCC CTGAACAGGG GGGAACGGCT CGGCCTTGTG GGCGAATCCG GGGCGGGAAA ATCCGTGACC GGCTTTTCCA TAATCAATCT TGTCAGCAAG CCCGGCCGCA TCACCGGCGG TTCCATACTG TTTGAAGGAC ACGACCTGAC CAAAGCTTCG CCCGAAGTAC TGCGTCACAT CAGGGGCAAC CGCATCAGCA TGATCTTTCA GGATCCCATG ATGACCCTGA ACCCCGTGCT GACCATAGGT ACCCAGATGG TGGAAACCAT TCTGGCGCAC AAGAAAGTCT CGGTGAAAGA AGCGGAAGCC ATTGCGCTGG AAAAACTGCG CAAGGTGTAC ATACCCTCGC CGGAAAAACG GCTTAAACAG TACCCGCACG AGTTCTCCGG CGGCATGCGC CAGCGCATAG TCATCGCCAT CGCGCTGCTT ACCTCGCCCG CGCTTATCAT CGCGGACGAG CCCACCACGG CGCTGGACGT GACCATTCAG GCCGAGATCA TGGATTTGCT GCTTGAGCTG TGCGAATCGG AAAACATGGG CCTTATTCTC ATCACGCACG ACCTCGGCGT GGTGTCTCAG GTCACCGAAA AGATAGCCGT CATGTATGCC GGGCGCATAG TTGAAATGGG CGAAACGGAC AAAGTGGTCG CCGCGCCCCA GCATCCCTAT ACCAAAGGTC TGCTGGCCGC CCTGCCGCAG GGGGTCAAGG GCAAACGCCT CAACCAGATA CCCGGCATCA TGCCCGGTCT CGGCTCCATT CCCCGAGGCT GTGCGTTCAA CAACCGCTGT ACCTGCCGCG AAGACCAGTG TCTTCAGGAG CGGCCCTGTC TGGAACTCAA GAAATCAGGC GGCATGGCTG CCTGCCACAT TCTGGAATAA
|
Protein sequence | MSTLLEVKNM TVQFAMRDTQ LTAVDNVSFS LNRGERLGLV GESGAGKSVT GFSIINLVSK PGRITGGSIL FEGHDLTKAS PEVLRHIRGN RISMIFQDPM MTLNPVLTIG TQMVETILAH KKVSVKEAEA IALEKLRKVY IPSPEKRLKQ YPHEFSGGMR QRIVIAIALL TSPALIIADE PTTALDVTIQ AEIMDLLLEL CESENMGLIL ITHDLGVVSQ VTEKIAVMYA GRIVEMGETD KVVAAPQHPY TKGLLAALPQ GVKGKRLNQI PGIMPGLGSI PRGCAFNNRC TCREDQCLQE RPCLELKKSG GMAACHILE
|
| |