Gene Dde_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0271 
Symbol 
ID3755289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp261821 
End bp262834 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content60% 
IMG OID637781131 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_386767 
Protein GI78355318 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACAA CACCGTTGCT CGATCTGAAA AACCTGTCCA AGCGGTTCGA CATTTCCGGC 
GGACTGCTGG ACCAGCTGCG TTTTCAAGGC GGCAGACTGA CACGCAGAAA AACCGTGGTG 
CATGCCGTGA ACAATGTCTC GTTTTCCATA AACGAAGGCG AAACCCTGTC TGTGGTGGGC 
GAATCCGGCT GCGGCAAATC CACGCTGGCA CGCACGGTCA TAGGGCTGTA CCGGCCCAAT 
GCCGGTGAAA TAATCTACCG CGGCCAGCGT ATAGACAATC TGTCAGAAAA AGCAGCCCTG 
CCCTACCGCA CCCGCATGCA GATGGTCTTT CAGGACCCGT ACGCCTCGCT CAACCCGCGT 
ATGCGCGTAC GTCAGATTCT GGAAGAACCC GTGCGGTTTC ACAACCCAGC CATGACCGGC 
GCCGAAGTAC GCGAACGCGT GGCGGGTGTG ATGGATCAGG TGGGCATAAA CCCCGCATGG 
GCAGACAGAT ACCCACACGA GTTTTCCGGC GGCCAGCGGC AGCGCATATC CATCGCGCGG 
GCGCTGGTGG TCAAGCCGGA ATTCATTGTG GCCGACGAAC CCATATCCGC ACTGGATGTG 
TCCATTCAGG CGCAGGTACT CAATCTGCTG ATGGACCTGC AGGAAGAATT CGGCCTGACG 
TATCTGTTCA TCAGCCACGA TCTGTCTGTG GTGGAACACA TTTCCAACCG CGTGGCGGTC 
ATGTATCTGG GCAGCCTGTG TGAACTGGCT ACGGCGGAAT CGCTTTTTGA AAATCCCCGC 
CATCCCTACA CGCAGGCGCT GCTTTCCGCC ATTCCGCGCA TCGGGCAGAA AGGCTCGCGG 
CATATCCGCC TGACCGGTGA TGTGCCCACG CCCATCAACC TGCCCAGCGG ATGCGTATTC 
AACGGCAGGT GTCCGCACGC GGACGACCGC TGCCGCCACG AGACCCCCGA GGCCCTGATG 
CAGCCAGACG GTGCTCTGGT TGCCTGCCAC GCGCGGCAGG AAGGCCGTAT CTGA
 
Protein sequence
MATTPLLDLK NLSKRFDISG GLLDQLRFQG GRLTRRKTVV HAVNNVSFSI NEGETLSVVG 
ESGCGKSTLA RTVIGLYRPN AGEIIYRGQR IDNLSEKAAL PYRTRMQMVF QDPYASLNPR 
MRVRQILEEP VRFHNPAMTG AEVRERVAGV MDQVGINPAW ADRYPHEFSG GQRQRISIAR 
ALVVKPEFIV ADEPISALDV SIQAQVLNLL MDLQEEFGLT YLFISHDLSV VEHISNRVAV 
MYLGSLCELA TAESLFENPR HPYTQALLSA IPRIGQKGSR HIRLTGDVPT PINLPSGCVF 
NGRCPHADDR CRHETPEALM QPDGALVACH ARQEGRI