Gene Dde_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0178 
Symbol 
ID3755349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp163968 
End bp164786 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content55% 
IMG OID637781037 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_386674 
Protein GI78355225 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATG ATATGGAAGC TCTTTATGCG GCCCAGACGG TGCTTATCAT TGAAGACAGC 
CCCGTTCAGT CAAAAATAAT CCGCAACCAG ATAATGGCGC TCAGCCAGTT TGACACGCTG
GCTGCATATA CGCTGGAAGA AGCCAGAGCC CTGCTGACCA CCCACAAAGA GCGTATTTTC
GTGGCGGTCA TAGACCTGAA TCTGCCCGAC GCCCCCAACG GCGAGGGCGT GGATCTGTGC
CTTGATTTCG GGGTGCCCAC CGTGGTGCTT ACCGCCACCT TCAACGAGGA TATCCGCAGA
CGGTTCATCG AGCGCAATGT GGCCGATTTC TTTTTCAAGG GCACCATTCA GGATATGGAC
CCCATGGTCC GCAGTCTGGA GCGGCTTTTT AAAAACCAGT TTGTCAAAGC CCTTGTGGTC
GAAGATTCGC GCATGTCTCG TGCCCACCTG CGCCATCTGC TCGAAGTGCA GCGCTTTCAG
GTGCTGGAAG CCGCCGACGG GCTGGAAGCC GTGGACAGGC TGGCGGAAAA TCCTGACATC
GGTCTGATAA TTACCGACTA CAACATGCCC AACATGGACG GCTTTGAACT GGTGAAGACC
GTGCGTGCCC GCTACAAGGT CGACCGTATC GCCATAGTGG GCGTTTCCGC CGCGGGGTCA
GGTTCGCTGA CGGCGCAGTT TCTGAAAAAC GGCGCCAACG ATTTTCTGAC CAAGCCGTTT
GAGGTGGAGG AATTTTACTG GCGCGTTAAC CAGACCGTAA GCGTGCTGGA AGTGATGAAA
GACCTGCGGA CCTGTCAGGA TACCTTGCCG GAGGGATAA
 
Protein sequence
MMNDMEALYA AQTVLIIEDS PVQSKIIRNQ IMALSQFDTL AAYTLEEARA LLTTHKERIF 
VAVIDLNLPD APNGEGVDLC LDFGVPTVVL TATFNEDIRR RFIERNVADF FFKGTIQDMD
PMVRSLERLF KNQFVKALVV EDSRMSRAHL RHLLEVQRFQ VLEAADGLEA VDRLAENPDI
GLIITDYNMP NMDGFELVKT VRARYKVDRI AIVGVSAAGS GSLTAQFLKN GANDFLTKPF
EVEEFYWRVN QTVSVLEVMK DLRTCQDTLP EG