Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0113 |
Symbol | |
ID | 3756431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 104526 |
End bp | 106763 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637780971 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_386609 |
Protein GI | 78355160 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGC CGGAAGACTT GCAGCCCGTT GTGCTCAACC AGAATGCAGA GGTCGTGCTT TCGAAGCGTT ATTACCGCAA AGGCCCTGAC GGAGAACCGC TGGAAGATGC CACGGGGCTT TTCTGGCGTG TGGCGTCTGC CATCGCGGCG GAGGAGGGTA AATACCCTGA TTCGTCGTGC AGGGCGGACG AACTGGCCCG TGAATTTTAC GACCTGATGA CATCGTGGAA ATTTTTACCC AATTCTCCCA CGCTGATGAA TGCGGGCACT GATCTGGGTC AGCTGGCGGC CTGTTTTGTG CTGCCGGTGG GTGATTCCAT AGAAGAGATT TTTGACGCCG TGAAACATGC CGCCATGATT CATAAATCAG GAGGCGGAAC AGGGTTTTCA TTCTCGCGCC TGCGTCCGGC GGCCAGCCGT GTGGGGTCCA CGGGCGGGGT TGCCTCGGGC CCGCTTTCTT TTTTACGCAT TTTCAATACC GCCACGGAGC AGATTAAGCA GGGAGGCACA CGCCGCGGGG CCAATATGGG CATTCTGCGT GTGGACCATC CGGACATTCT GGAGTTCATC CGCGCCAAGG AACGTGAAGG GGAATTCAAT AACTTCAACC TTTCCGTTGC GCTGACCGAA GACTTTATGA AGGCGGTGGA AAAAGGTGAA GAATATCCTC TGATGGCGCC GCACTCCGGC GAAGCCAAAG GTACCCTGAA TGCCCGTGAG GTGTTTGAGA TACTGGTGCA GAAAGCGTGG GAGTCGGGGG ATCCGGGCAT TGTTTTCATT GACCGGATAA ACCGTGACAA CCCCACGCCC GCACAGGGCG AGATGGAGTC CACAAACCCG TGCGGGGAGC AGCCACTGCT GCCTTACGAG GCCTGCAATC TCGGTTCCGT CAATCTGGCC GGACTGTACC TTGCGGGGCA TGGCAGCACG GCAGATTCCA TAGACTGGGC AGAGCTTAAG CGTATTATCA GGCTTTCCGT GCGTTTTCTG GATAATGTCA TCGATGCTTC GCGCTATCCG CTGGACCGCA TAACAGAAAC GGTGCACAGA AACCGCAAAA TCGGGCTGGG CGTCATGGGC TGGGCCGACC TGCTGTTTCA GCTGCGCATT CCCTACGACA GTCAGGATGC CGTTAAGCTT GCCGGCCGTG TCATGGAATT CATCCGCGCG GAAGGCCGTG CCGCCTCCAA ACAGCTTGCC AAGGAACGCG GACCCTTTCC GGCTTACGCC GAGTCAGTGT TCGGACAGCG GGACCTCGGA CCATACCGCA ACGCCACCAT AACGACCATT GCCCCCACCG GAACCCTGTC CATTCTTGCG GGATGCTCTT CCGGGGTTGA ACCGTTGTTT GCGCTCAGCT TTGCGCGGCA TGTCATGGAC GGCGAGCGTC TGGTGGAAGT GAATCCTTAT TTTGAGCAGG CGCTCAAGGA CGAGCAGTGC TATTCTGAAA AGCTGATGGA AGCTGTAACG CAGAAAGGGT CTGTGCAGAC AATGGAGCAC CTGCCGCAGC ATATGCGCGA TGTTTTTGTG ACAGCCATGG ACATAGAGCC CGTATGGCAT CTGAAAATGC AGGCGGCGTT TCAGGAATAT ACCGACAACG CCGTGTCCAA GACCGTCAAC CTGCCCAACA GCGCAACCAT TGACGACATA CGCAGCATTT ACTGGATGGC GTATGAGCGG GGCTGCAAGG GGGTTACCGT ATACCGTGAC GGCTGCAAAC AGTCGCAGGT TCTGTGCACC GGCGACGGAG AAAAAAGCAA GGAAGAGCAG AAAAAAGAAC GCAGCGTTGT GCGTGAACGT CCTGATATCG TATACGGATT TACCCAGAAA GTGGAAACGG GGCTGGGTGT GCTGTATGTG ACTATTAACG AAGTGGACGG AAGGCCGTTT GAACTGTTCA CCACCATAGG CAAGTCGGGA CGGTCCATCA CCGCAAAGGC GGAAGCCATC GGCAGACTGG TTTCGCTGGC GCTGCGCTCC GGCGTTGAGG TGGTGGAAAT AGTGCGGCAG CTCAAGGGTA TAGGCGGAGA ACACCCCAAG TTTCAGAAAA AAGGATTGCT GCTGTCCATA CCCGATGCCA TTGCATGGGT AATGGAAAAC AGGTACCTAA AGGCCAAGGT GCCCGTACAC GCTCCCAACG GGCTCGGTAG GCAGCAGTGC CCCGATTGCG ATGAAGAACT GGTGTTTCAG GAAGGCTGCC ATATCTGCCC TGCCTGCGGA TTCACCAAAT GCGGCTGA
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Protein sequence | MKQPEDLQPV VLNQNAEVVL SKRYYRKGPD GEPLEDATGL FWRVASAIAA EEGKYPDSSC RADELAREFY DLMTSWKFLP NSPTLMNAGT DLGQLAACFV LPVGDSIEEI FDAVKHAAMI HKSGGGTGFS FSRLRPAASR VGSTGGVASG PLSFLRIFNT ATEQIKQGGT RRGANMGILR VDHPDILEFI RAKEREGEFN NFNLSVALTE DFMKAVEKGE EYPLMAPHSG EAKGTLNARE VFEILVQKAW ESGDPGIVFI DRINRDNPTP AQGEMESTNP CGEQPLLPYE ACNLGSVNLA GLYLAGHGST ADSIDWAELK RIIRLSVRFL DNVIDASRYP LDRITETVHR NRKIGLGVMG WADLLFQLRI PYDSQDAVKL AGRVMEFIRA EGRAASKQLA KERGPFPAYA ESVFGQRDLG PYRNATITTI APTGTLSILA GCSSGVEPLF ALSFARHVMD GERLVEVNPY FEQALKDEQC YSEKLMEAVT QKGSVQTMEH LPQHMRDVFV TAMDIEPVWH LKMQAAFQEY TDNAVSKTVN LPNSATIDDI RSIYWMAYER GCKGVTVYRD GCKQSQVLCT GDGEKSKEEQ KKERSVVRER PDIVYGFTQK VETGLGVLYV TINEVDGRPF ELFTTIGKSG RSITAKAEAI GRLVSLALRS GVEVVEIVRQ LKGIGGEHPK FQKKGLLLSI PDAIAWVMEN RYLKAKVPVH APNGLGRQQC PDCDEELVFQ EGCHICPACG FTKCG
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