Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0107 |
Symbol | |
ID | 3758849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 97828 |
End bp | 98616 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637780965 |
Product | putative lipoprotein |
Protein accession | YP_386603 |
Protein GI | 78355154 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAGGA ATATGAAAAA ATGGCTTTTT GCCGCACTGA CAGTGGCGGT ACTGGTTGTC TCTGCCTGTG CCAAGGCGCC GTATACCGGC CGCAACCAGT TTATCATGAT GGATTCGCAG CAGGAAATGG CGCTGGGGGC CTCTGAAGCG CAGAAAGTGA TCAAGTCGGA GCAGATTGAT ACCACAAGCG ACTATGCCCG TGCCGTGACC CGCGTGGGGC GCCGCATAGC GGCCGTGGCC GGACACCCTG AATATAAATG GGAATTTCAT ACCGTCAAAA AAGACGTACC CAACGCCTTC TGCCTGCCGG GCGGAAAAAT ATTTGTGTAT ACAGGGCTGT TTGAAGCCGC CAAAGACGAT GCGCAGCTGG CCGCTGTTAT CGGTCACGAA GTGGGCCACG CCATCGCGCG GCACGGGGCG GAGCGGTATT CCACACAGGT TGTGGCGCAG CTGGGGCAGC TGGGGACGGC CATCGCCGTG GGCTCCCAGA CATCGCCTGA GGTGGCGCAG GCCGCGGTGG CGGCGTATGG TATAGGTGTG GGCGTGGGCA TACTGCTGCC CTACAGCCGC ACCCACGAAT ACGAGGCCGA CCGGATAGGT CTTATTCTTA TGGCCAAGGC GGGGTACAAC CCGGAAGCCG CGCTGACTTT CTGGCAGAAC ATGGCTGCCA AGGGCGGCAA AAAACCGCCG GAGTTCCTTT CTACCCACCC TGCTGATGAA AACCGCATAA AAGCCATCCG CCAGCTGCTG CCCGAGGCAA AAGGCTACTA CCGGCCCGCA TCTTCATAA
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Protein sequence | MRRNMKKWLF AALTVAVLVV SACAKAPYTG RNQFIMMDSQ QEMALGASEA QKVIKSEQID TTSDYARAVT RVGRRIAAVA GHPEYKWEFH TVKKDVPNAF CLPGGKIFVY TGLFEAAKDD AQLAAVIGHE VGHAIARHGA ERYSTQVVAQ LGQLGTAIAV GSQTSPEVAQ AAVAAYGIGV GVGILLPYSR THEYEADRIG LILMAKAGYN PEAALTFWQN MAAKGGKKPP EFLSTHPADE NRIKAIRQLL PEAKGYYRPA SS
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