| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0099 |
|---|
| Symbol | asnC |
|---|
| ID | 3758841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 89444 |
|---|
| End bp | 90829 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637780957 |
|---|
| Product | asparaginyl-tRNA synthetase |
|---|
| Protein accession | YP_386595 |
|---|
| Protein GI | 78355146 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTA CGCAGATACT CGACGCCCTC AACGCATCCG CCCCCTGCGA CGATATCCGC
ATCTGCGGAT GGGTGCGCAC CCGCCGTGAT GCCAAAGGCT TTTCCTTTCT CGAACTCAAC
GACGGGTCGT GCCTGACCAA TATACAGGTT ATCGTCGATG AAGAGACCGA TGCCTACCGT
TCGGTGGGAG AAGCCACCAC GGGCGCCTCG GTGGACATCC GCGGGCAGCT GGTGGAATCG
CCGGGCAAAG GGCAGAAATG GGAAGTGCGC GCCGCAACCA TGACGCTGCT GGGCAAAGCC
GACCCCGAAA CTTTTCCGCT GCAGAAAAAA CGCCATTCCG ACGAATACCT GCGCACCATC
GCGCATCTGC GTCCGCGCAC CAACAAATTT GGCGCCGCGT TCCGCATCCG CGCGGAAGCA
AGCTACGCGG TGCACTCATT TTTCCGCGAA AACGGCTTTT TCAACGTGCA CACGCCCATT
CTCACCGGTT CGGACTGTGA AGGCGCCGGA GAAATGTTCC GGGTGACCAC CCTGCCCGCG
GTGGGCGCAT CGGCACCCGC AGAAGGTTCG GTGTTTGACG GGGACTTTTT CGGCAAGGAA
TGCAGCCTGA CCGTTTCCGG TCAGCTGGAA GCTGAAATAA TGGCACAGAG TCTCGGCAAG
GTTTACACCT TCGGCCCCAC CTTCCGCGCC GAAAATTCCA ACACTCCGCG CCATGCCGCC
GAATTCTGGA TGGTCGAGCC GGAAATGGCC TTTGCCGACC TTGAAGACGA CATGCAGCTG
GCAGAAGACA TGGTCAAGTA TGTAATCAGC CATGTGATGA AGCATTGCGC AGCTGACCTG
GACCTGTTCT GCAAGTTTGT GGATAAAGAG CTTTCCGCGC GGCTTGAAAA CATTCTCGCC
CACCCCTTTG CCCGCGTCAG CTACACGGAA GCCATCGAAA TCCTGAAAGC CAGCGGCAGA
AAATTTGAAT ACCCCGCCGA GTGGGGCGCA GATCTGCAGA CCGAACATGA GCGCTATCTG
GCCGAAGAAC ACTTTAAAAA GCCTGTGGCT GTCTATGACT ACCCCAAAGA AATCAAGGCT
TTTTACATGC GTCTGAATGA TGACGGCAAA ACCGTGGCCG CCATGGACCT GCTGGTGCCG
CGCATCGGCG AACTGGTTGG CGGTTCGCAG CGCGAAGAGC GGCTGGACGT GCTGGAAGCC
CGCATAAAAG AACTGGGCCA GAATCCTGAT GATTACTGGT GGTACCTGGA ACTGCGCAAA
TTCGGCACCG CTCCCCACGC CGGCTTCGGC ATGGGGTTTG AGCGTCTGCT CATGCTGCTT
ACCGGCATCG GCAACATCCG CGACGTCATT CCCTTTCCCC GTACGCCGCG GCATCTGGAA
TTTTAG
|
|---|
| Protein sequence | MKRTQILDAL NASAPCDDIR ICGWVRTRRD AKGFSFLELN DGSCLTNIQV IVDEETDAYR
SVGEATTGAS VDIRGQLVES PGKGQKWEVR AATMTLLGKA DPETFPLQKK RHSDEYLRTI
AHLRPRTNKF GAAFRIRAEA SYAVHSFFRE NGFFNVHTPI LTGSDCEGAG EMFRVTTLPA
VGASAPAEGS VFDGDFFGKE CSLTVSGQLE AEIMAQSLGK VYTFGPTFRA ENSNTPRHAA
EFWMVEPEMA FADLEDDMQL AEDMVKYVIS HVMKHCAADL DLFCKFVDKE LSARLENILA
HPFARVSYTE AIEILKASGR KFEYPAEWGA DLQTEHERYL AEEHFKKPVA VYDYPKEIKA
FYMRLNDDGK TVAAMDLLVP RIGELVGGSQ REERLDVLEA RIKELGQNPD DYWWYLELRK
FGTAPHAGFG MGFERLLMLL TGIGNIRDVI PFPRTPRHLE F
|
|---|
| |