| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0003 |
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| Symbol | |
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| ID | 3755945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2797 |
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| End bp | 5190 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637780856 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_386499 |
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| Protein GI | 78355050 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.561355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACG AGACACAAAA GCAGAGCTAC GACGCGGCGA ACATCACCGT TCTTGAGGGG
TTGTCCGCTG TGCGCATGCG CCCTGCCATG TACATAGGCA GCACTGACAG CCGCGGTCTG
CACCATCTGG TTTACGAAGT GGTGGATAAC TCCATCGACG AAGCCATGGC GGGATACTGC
GATAAAGTCA CCGTGAAGCT GCATCTTGAT AACAGCGTGA CCGTTATTGA TAACGGACGC
GGCATTCCCG TGGACATCCA CCCGAAAGAA GGCCGTCCCG CGGTTGAAGT GGTCATGACC
GTGCTGCATG CCGGCGGCAA GTTCGACAAC GATTCGTACA AGGTGTCGGG CGGGCTGCAC
GGGGTGGGTG TTTCGTGCGT GAACGCCCTT TCCGAATATC TCGAAGTTAC CGTGCGTCGT
GACGGGTATA AATATCATCA CCGCTTTGAA CGCGGTGTAC CGGTCAAGGA ACTGGAGCGC
GTCGGAGAAA CCGACCTGCG CGGCACCACC ATCCGCTTCC GTCCGGACGA AGAAATTTTT
GAGACCAATC AGTTTTCCTT CGATATCCTC AAAAAACGCT TTGAGGAGCT CGCGTACCTC
AATCCCGGGC TCGAGGTCGA GTTCATAGAC GAACGTACCG GAGATACCGC CTCGTTTCAT
TACGAGGGGG GTATCCGTGA GTTTGTGAAG AACCTGAACT CCGGCGAAGG CGGGGTGCAC
TCCATCATTT TCGCTTCGGG CGAATCGGAT AACGTGATGG TGGATTTCGC GTTGCAGTAC
AACGCGGGGT ATAAGGAAAA CATGCTCACC TTTGCCAACA ACATCCGCAC CAAGGAAGGC
GGCACGCACC TTGCCGGCTT CAAGACCGCG CTCACAAGGG CCATCAACAA CTACATCCAG
AACTCCGACC TGCCTAAAAA GCTCAAGGTC AAACTGTCGG GTGATGATGT GCGGGAAGGT
CTGACCGGCG TTGTCAGTGT TAAACTGCCC AATCCGCAGT TTGAAGGGCA GACAAAGACC
AAGCTGGGCA ACAGCGAGGT GGCGGGTATT GTCTCCGGTC TGGTGTATGA AAATCTCAAC
ACCTACTTCG GCGAAAACCC CAAAGATGCC AAGCTGATCA TAGAAAAGGC CGTGGATGCC
GCCCGTGCAC GTGACGCCGC CCGCAAGGCG AAGGATCTTG TACGGCGCAA AGGGGCGCTT
TCCGACAATG CCCTGCCCGG CAAGCTGGCT GACTGCCAGA GCAAGGATCC CTCGGAATCC
GAACTGTTCA TCGTGGAAGG TGACTCCGCA GGCGGTTCTG CAAAACAGGG GCGCAATCCT
TCCACTCAGG CCATTCTGCC GTTGCGCGGT AAAATTCTGA ACGTGGAAAA GACCCGCTTT
GACAAGATGC TGGCCAACAA GGAAGTCAAG GCTCTCATCA CGGCCATGGG GGCGGGAATA
GGCGAAGAAG ACATCGACTA CGGCAAGCTG CGGTACCACA AAATCGTCAT CATGACCGAC
GCCGACGTGG ACGGTGCCCA CATACGCACG CTGCTGCTGA CGTTCTTCTA TCGCCAGTAT
CCCGAGCTGA TAGACAGGGG GCACCTGTAT ATCGCCCAGC CGCCGCTTTT CCGTGTGTAC
AACAGCAAGT TCGAGCGGTT TATCAAAGAT GAAACCGAGC TGAACACCTA TCTGCTGGAA
CGCATTGCCA AAGACGTCGT CATCGAGGCG CATAACGGCA TGGAGTTCCG TGAAACGCAG
ATACTCGACC TGCTGAAAGC CATACGGTTC ATCAATGCCA GAATTGCCGA CGTGGAAAAC
GTGGGAATAG GCCGTAATCT CTTTCTCGCG TTTCTTGAAT ACGGCGAAAA ACTGTCGCCC
CAGTTTTTTG AGGCGCCTGA ATTCAACGGC TTCGGAACGT ATCTGCAGGA AAAAGGCTAT
TCCGTGCAGA CCAGCGTTGA CGAATCCGGA CTGGAACGCC GTGTGTACCT GGAATTTGAA
GACAGCAACG GGCACAAGAC CCGCATCGGC AACGAGTTCT TCAACTCCAA GATGTACAAA
CAGCCTTACG ATTCGATGGC CGACATGCGC CGCATCTGCG GCGGATTCTC GTTTGTGGTG
GACCGCAAGG GCGAACGGAC CGAAGTGGAA AACATCTTCG TTCTGCTGGA CCATGTGCTG
CAGGAAGCGC GCAAGGGTAT AAACATCCAG CGGTATAAAG GTCTGGGCGA AATGGATGCC
GAACAGCTTT GGGTGACCAC CATGAACCCC GAAAACCGCG TGCTGCTGCA GGTACAGGTG
GATGACGCGG AAGAGGCCAA CGAGATATTT GAACAGCTCA TGGGCGACAG GGTTGAACCG
CGCCGCGAAT TCATCGTGCG TAATGCCCTG AGCGTTCAGG AACTGGATAT TTAA
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| Protein sequence | MTNETQKQSY DAANITVLEG LSAVRMRPAM YIGSTDSRGL HHLVYEVVDN SIDEAMAGYC
DKVTVKLHLD NSVTVIDNGR GIPVDIHPKE GRPAVEVVMT VLHAGGKFDN DSYKVSGGLH
GVGVSCVNAL SEYLEVTVRR DGYKYHHRFE RGVPVKELER VGETDLRGTT IRFRPDEEIF
ETNQFSFDIL KKRFEELAYL NPGLEVEFID ERTGDTASFH YEGGIREFVK NLNSGEGGVH
SIIFASGESD NVMVDFALQY NAGYKENMLT FANNIRTKEG GTHLAGFKTA LTRAINNYIQ
NSDLPKKLKV KLSGDDVREG LTGVVSVKLP NPQFEGQTKT KLGNSEVAGI VSGLVYENLN
TYFGENPKDA KLIIEKAVDA ARARDAARKA KDLVRRKGAL SDNALPGKLA DCQSKDPSES
ELFIVEGDSA GGSAKQGRNP STQAILPLRG KILNVEKTRF DKMLANKEVK ALITAMGAGI
GEEDIDYGKL RYHKIVIMTD ADVDGAHIRT LLLTFFYRQY PELIDRGHLY IAQPPLFRVY
NSKFERFIKD ETELNTYLLE RIAKDVVIEA HNGMEFRETQ ILDLLKAIRF INARIADVEN
VGIGRNLFLA FLEYGEKLSP QFFEAPEFNG FGTYLQEKGY SVQTSVDESG LERRVYLEFE
DSNGHKTRIG NEFFNSKMYK QPYDSMADMR RICGGFSFVV DRKGERTEVE NIFVLLDHVL
QEARKGINIQ RYKGLGEMDA EQLWVTTMNP ENRVLLQVQV DDAEEANEIF EQLMGDRVEP
RREFIVRNAL SVQELDI
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