Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_4011 |
Symbol | |
ID | 8087401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 4650693 |
End bp | 4652708 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644838106 |
Product | putative oxidoreductase Fe-S binding subunit |
Protein accession | YP_002989585 |
Protein GI | 242241404 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAGT TTGTTATCGC AAATACAAAG GATTGTATGG GCTGCAGAGC CTGCGAGATC GCCTGCGTTA TTTCCCATAA CCAGGGGGTT TACCCGGAAA GTAAAGAGCA CTTCAAACCC CGCATCAGGG TGTTCCACCA GGCCGAACGT CACACCGCCG TGACCTGCCG CCATTGTGAA GATGCGCCGT GCGCCAGTGT TTGCCCAACT CAGGCGCTGG TTAGAAAAAA CGAGAGTATT CAACTTATTC AGGAAAAGTG CATCGGTTGC AAAACCTGTG TACTGGCTTG TCCGTTTGGC GCGATCAGCG TTGAAACCCA GCAAGGTACG GCCACCGCGC ACAAATGCGA TCTGTGTGCT GACCGCGCTG AAGGCCAGGC GTGCGTAGCA GCCTGCCCGA CTCAGGCTCT CCAGCTAGTC AGTGAGCGTT CACTAGAAGA ACAACGCAGG GAAAAACAGC GCCGCAGCGC ATTGAGCGCC GGGCCGGGGA TACAACGGCC ACTGCCGACC CTGACAGACA TAACCCGTCA TCCGCACCCG TTGGAAAAAC GTAAAAACTG GCCAAGACTG GATGCGGAGA AAAAGCCGCT TACCGAGCGC ATTTCCACTT TTAATGAGAT TTATCGGGGC TTTACCCCCG TCCAGACGGA AGATCAGGCC AGCCGCTGCA TGCGCTGCGG CAATCACGCC GTTTGCGAAT GGACCTGCCC TCTGCACAAC AATATTCCAG AGCTATTGAA GCTAGCGCGG GAAGGAAAAA TCATGGAGGC GGTGGAGCTT TCCCATCAAA CCAGCAGCTT GCCGGAAATC TGCGGTCGGG TTTGCCCGCA AGACAGGCTA TGCGAAGGCG CCTGTACGCT AGGTAAAAAC TATGGCGCGG TTACGGTGGG CAACATCGAG CGCTACATTA CCGATACCGC GCTGAAAATG GGCTGGAAGC CCGACCTTAG CCAGGTCAAA TCGACCGGGA AACGCGCCGC CATCGTCGGC GCAGGGCCTG CCGGCCTGGC CTGTGCCGAT GTGCTGGCGC GCCATGGCGT TCAGGCGGTA GTGTTCGATC GTCATCCGGA AATCGGCGGA TTGCTGACCT TCGGTATTCC GGCATTCAAG CTGGATAAAT CCCTGTTGAT TCAACGCCGG GCGCTTTTTT CGGCCATGGG CATCGAATTC CGCCTGAATA CCGAAGTCGG ACAAGACATC AGCATGGCGC AATTGCTTGA TGAGTTTGAT GCCGTCTTTC TGGGCGTAGG TACCTATCGT TCGATGAAAG CCGGTATCGA TAATGAGGAC TCTCCCGGCG TTTACGACGC ACTGCCCTTT CTGATCGCCA ACACCAAACA GGTGATGGGA TTGCCGGAAC TGGAACACGA ACCTTACATA TCCATGGCGG GTAAACGAGT CGTGGTTCTG GGCGGCGGCG ATACCGCCAT GGACTGCCTG CGCACGTCGG TTCGGCAGGG GGCGGCTTCC GTGACCTGCG CCTACCGCCG TGATGAAGCC AACATGCCGG GTTCGAAAAA AGAGGTAAAA AATTCTCGTG AAGAAGGCGC TGAATTTCTG TTCAACGTGC AACCACAAAA AGTCTGCCTG AATGAAAACG GCGAAGTGTG CGGCATCAGC CTGATCCGAA CCGAACTGGG TGAGCCGGAT GCCGGCGGCC GACGGCGGCC GCGCCCGATC CCCGGCTCCG AGTTCATCCA GCCGGCGGAT GCCATCATTA CCGCCTTTGG TTTCCAGACG CACAGCATGC CTTGGCTGCA GGAAGCGCAG ATCGGTTTAG ATAAATGGGG CCATATCACC ATTCCGGCAC CGGGCAGCAA TGGCAAACTG GCTTGCCAGA CCAGCCACCC GCGCGTCTTC GCCGGCGGCG ATGCCGTGCG CGGCGCCGAC CTGGTGGTGA CAGCCATCGT CGACGGCCGT AAAGCGGCGC TGGGCATGAT TCAGGTGATG GGGATAGAAG AGCACGCCGG GGCACCCGCC GGCATAAACG CCGTTGCGGG AGCGACACAG TTATGA
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Protein sequence | MNQFVIANTK DCMGCRACEI ACVISHNQGV YPESKEHFKP RIRVFHQAER HTAVTCRHCE DAPCASVCPT QALVRKNESI QLIQEKCIGC KTCVLACPFG AISVETQQGT ATAHKCDLCA DRAEGQACVA ACPTQALQLV SERSLEEQRR EKQRRSALSA GPGIQRPLPT LTDITRHPHP LEKRKNWPRL DAEKKPLTER ISTFNEIYRG FTPVQTEDQA SRCMRCGNHA VCEWTCPLHN NIPELLKLAR EGKIMEAVEL SHQTSSLPEI CGRVCPQDRL CEGACTLGKN YGAVTVGNIE RYITDTALKM GWKPDLSQVK STGKRAAIVG AGPAGLACAD VLARHGVQAV VFDRHPEIGG LLTFGIPAFK LDKSLLIQRR ALFSAMGIEF RLNTEVGQDI SMAQLLDEFD AVFLGVGTYR SMKAGIDNED SPGVYDALPF LIANTKQVMG LPELEHEPYI SMAGKRVVVL GGGDTAMDCL RTSVRQGAAS VTCAYRRDEA NMPGSKKEVK NSREEGAEFL FNVQPQKVCL NENGEVCGIS LIRTELGEPD AGGRRRPRPI PGSEFIQPAD AIITAFGFQT HSMPWLQEAQ IGLDKWGHIT IPAPGSNGKL ACQTSHPRVF AGGDAVRGAD LVVTAIVDGR KAALGMIQVM GIEEHAGAPA GINAVAGATQ L
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