Gene Dd703_3979 details

Gene Information

• Locus tag: Dd703_3979
• Symbol: trkD
• ID: 8087369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: -
• Start bp: 4615368
• End bp: 4617236
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644838075
• Product: potassium transport protein Kup
• Protein accession: YP_002989554
• Protein GI: 242241373
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3158] K+ transporter
• TIGRFAM ID: [TIGR00794] potassium uptake protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.356267
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTCAG AACATAAACG CTCACTTCCT GCGGTGACGC TGGCGGCAAT CGGGGTGGTC 
TATGGCGATA TAGGTACCAG CCCGCTGTAT ACGCTCAGGG AGTGTCTTTC AGGTCAGTTT 
GGTTTTGGCG TCGAGCCTGA TTCCGTTTTT GGTTTTCTCT CGCTGATTTT CTGGCTGCTG 
GTGCTGGTGG TCTCCCTGAA GTATCTGTCC TATGTGATGC GGGCGGATAA TGCCGGGGAA 
GGGGGGATCC TGACGCTGAT GTCGCTGGCG GGTCGCAATA CGTCAGATCG GGTAACTGCC 
GCGGTGGTGA TTATGGGGCT GATCGGCGGC AGTTTTTTCT ATGGCGAAGT GGTGATTACG 
CCGGCCATTT CGGTGATGTC GGCGATTGAA GGCCTGGATA TCGTGGCGCC CTCGCTGGAT 
ACCTATATCG TACCGGTGTC GATCGTCGTA CTCACGTTGC TGTTTATGAT TCAAAAGCAC 
GGTACCGGCC GGGTCGGCAG CCTGTTTGCG CCGATCATGA TGCTTTGGTT CCTGTCGCTG 
GGGGTGCTGG GCGCTCGCAG CATTATCGCC AATCCCGAAG TGTTGCGGGC GATGAACCCG 
ATGTGGGCAG TCAACTTTTT TACCCAGTAC AAAGCGGTCT CTTTCTTTGC TTTAGGCGCG 
GTGGTGTTGG CGATTACCGG GGTGGAAGCG TTGTATGCCG ACATGGGGCA TTTCGGCAAA 
AAGCCTATCC GTATCGCCTG GTTTTCGGTG GTGTTGCCGT CGCTGGTACT CAATTATTTC 
GGGCAAGGGG CGTTGTTGTT GAAAACGCCG GATGCCATCA AGAACCCGTT CTTCCTGCTG 
GCGCCCGATT GGGCGCTGAT TCCTCTGTTA GTGCTGGCGA CGCTGGCGAC CATTATCGCC 
TCTCAGGCGG TGATTTCCGG TGTATTTTCG TTGACGCGCC AGGCGGTGCG CCTGGGCTAT 
TTGCCGCCGA TGCGAATTGT GCACACCTCG GATATGGAGT CCGGGCAAAT CTATATTCCG 
GTGATTAACT GGCTGCTGTA TATCGCCGTG GTGATCGTGA TCGTCAGTTT CGAACACTCC 
AGCAATCTGG CGGCGGCCTA CGGCATCGCC GTTACCGGCA CCATGGTGTT GACCAGCATT 
CTTTCCTGTA CCGTCGCGGT GAAAAACTGG AACTGGTACC GCTATCTGGT ATGGCTGCTG 
TTGGCCGCAT TGCTGTTCAT TGATGTGCCG ATGTTCCTGG CCAACGTGGT GAAAATCGTT 
TCCGGCGGTT GGTTGCCGTT GGCGCTGGGG TTGGTGATGT TCGTCATCAT GACCACCTGG 
AAAAGCGAAC GTTTCCGTCT GCTGCGTCGG GTGCATGAGC ACGGCAACTC GCTGGATGCG 
ATGATCGTTT CGCTGGAAAA GAATCCGCCG GTGCGGGTGC CCGGTACGGC GGTTTATCTG 
TCTCGCGCTA CCCATGTTAT CCCGTTTGCG TTGCTGCATA ACCTTAAACA CAACAAGGTG 
TTGCACGAGC GCGTGGTGTT GTTGACCATG CGCACGGAAG ATGCGCCTTA CGTGCACAAT 
GCCCGGCGTG TGTCGGTTGA ACAGCTTTCT CCGACTTTCT GGCGGGTGAT CGCCAACTAC 
GGCTGGCGGG AAACGCCCAA CGTGGAAGAA GTCTTCCATC GTTGCTGGCA GGATGGTTTG 
ACCTGCCAGA TGATGGAGAC CACTTTCTTC TTGTCGAACG AGTCGCTGAC GATGGGCAAA 
CGCCCCTGGT ATCTGCGTAT TCGCGGCAAG CTGTTCATGA TGCTCAGCCG AAACGCGCTG 
CGGGCGGCGG ATCAGTTCGA GATCCCACCC AATCGGCTGA TCGAACTGGG TATTCAGGTT 
GAGATCTAA 

 

Protein sequence

MSSEHKRSLP AVTLAAIGVV YGDIGTSPLY TLRECLSGQF GFGVEPDSVF GFLSLIFWLL 
VLVVSLKYLS YVMRADNAGE GGILTLMSLA GRNTSDRVTA AVVIMGLIGG SFFYGEVVIT 
PAISVMSAIE GLDIVAPSLD TYIVPVSIVV LTLLFMIQKH GTGRVGSLFA PIMMLWFLSL 
GVLGARSIIA NPEVLRAMNP MWAVNFFTQY KAVSFFALGA VVLAITGVEA LYADMGHFGK 
KPIRIAWFSV VLPSLVLNYF GQGALLLKTP DAIKNPFFLL APDWALIPLL VLATLATIIA 
SQAVISGVFS LTRQAVRLGY LPPMRIVHTS DMESGQIYIP VINWLLYIAV VIVIVSFEHS 
SNLAAAYGIA VTGTMVLTSI LSCTVAVKNW NWYRYLVWLL LAALLFIDVP MFLANVVKIV 
SGGWLPLALG LVMFVIMTTW KSERFRLLRR VHEHGNSLDA MIVSLEKNPP VRVPGTAVYL 
SRATHVIPFA LLHNLKHNKV LHERVVLLTM RTEDAPYVHN ARRVSVEQLS PTFWRVIANY 
GWRETPNVEE VFHRCWQDGL TCQMMETTFF LSNESLTMGK RPWYLRIRGK LFMMLSRNAL 
RAADQFEIPP NRLIELGIQV EI