Gene Dd703_3961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3961 
SymbolglnL 
ID8087347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4590831 
End bp4591880 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content55% 
IMG OID644838053 
Productnitrogen regulation protein NR(II) 
Protein accessionYP_002989536 
Protein GI242241355 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.138406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAG GCACGCTGCC CGATGCTGGG CAGATCCTAA ATTCTTTAAT AAACAGTATT 
TTATTACTGG ATAAAGATCT GGCTATTCAC TACTCCAACC CGGCGGCGCA GCAACTTCTG
GCGCAAAGCT CGCGCAAGCT GTCAGGAACG CCGCTACCGG AACTGTTGGG CTATTTTTCG
CTGAATTTGG ATCTGATGCG AGAAAGCCTC GACTCAGGGC AAGGCTTTAC CGATAACGAA
GTCACCCTCG TGGTGGACGG CAAGGCGCAT ATCATGTCCA TCACCGCTCA GCGTATACAG
AATGACTTCA TCCTGATGGA AATGGCGCCA ATGGATAACC AGCGTCGGCT CAGTCAGGAA
CAACTGCAAC ATGCCCAACA GCAAGCAGCC CGGGATTTGG TACGCGGGTT GGCGCACGAA
ATCAAAAATC CTCTGGGCGG ACTGCGCGGC GCGGCGCAAT TGCTCTCCAA AGCGCTGCCC
GATCCCGCGC TGATGGAATA CACCAAGGTC ATCATTGAGC AGGCCGATCG CCTGCGCAAT
CTGGTCGACA GGTTACTCGG CCCGCAACAA CCCGGTTTGC ACGTTACGCA AAGCATTCAT
CAGGTGGCGG AACGGGTTTT TCAGCTGGTT TCGCTGGAAA AGGCCGATAA CGTTACTCTG
GTTCGGGACT ATGACCCCAG CCTGCCGGAA CTCATGCATG ACCCGGATCA AATAGAGCAA
GTTCTGCTGA ATATCACCCG CAATGCTCTG CAGGCACTGG GGGCAGAAGG CGGCACCATC
ACGATACGAA CCCGTACCGC TTTTCAGCTG ACTCTGCATG GCGTGCGCTA TCGGTTGGTC
GCCCGTATCG ATATCGAAGA CGATGGCCCC GGTGTTCCCG CTCATTTGCA GGATACGCTG
TTCTACCCGA TGGTGAGTGG TCGCGAAGGG GGAACCGGGC TGGGCTTGTC GATCGCCCGG
AACCTTATCG ATCAGCACTC TGGAAAAATT GAATTTAATA GTTGGCCAGG TCATACCGAA
TTTTCGGTTT ATCTGCCCAT TCGCCAGTGA
 
Protein sequence
MATGTLPDAG QILNSLINSI LLLDKDLAIH YSNPAAQQLL AQSSRKLSGT PLPELLGYFS 
LNLDLMRESL DSGQGFTDNE VTLVVDGKAH IMSITAQRIQ NDFILMEMAP MDNQRRLSQE
QLQHAQQQAA RDLVRGLAHE IKNPLGGLRG AAQLLSKALP DPALMEYTKV IIEQADRLRN
LVDRLLGPQQ PGLHVTQSIH QVAERVFQLV SLEKADNVTL VRDYDPSLPE LMHDPDQIEQ
VLLNITRNAL QALGAEGGTI TIRTRTAFQL TLHGVRYRLV ARIDIEDDGP GVPAHLQDTL
FYPMVSGREG GTGLGLSIAR NLIDQHSGKI EFNSWPGHTE FSVYLPIRQ