Gene Dd703_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3925 
Symbol 
ID8087310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4547405 
End bp4548223 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content53% 
IMG OID644838016 
Productsugar phosphatase 
Protein accessionYP_002989500 
Protein GI242241319 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.679086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAA AACTGATTGC AATTGATATG GACGGCACCT TACTCACACC ACAGAATCAG 
ATATCGCCGG CGGTGAAGCA CGCGATTACT GCCGCCAGGG AAAAAGGGGT GTACGTTGCG
TTGGCGACCG GTCGCCCTTT CATCGGGGTC AAGCGCTACC TGAGCGAACT GGCGCTGAGA
CAAGACGGGC ACTATTGCAT CACCAATAAC GGTGCGCTGG TTCAGCGTAC TCTGAACGGC
GACTGCATCG CGCAGACCAC CCTCAACTTT AACGACTATC TCTATTTTGA AGCCATGTCC
CGCGAGTTGA ACGTCCATTT CCATGCGCTG GATTTCGATT ACGTTTACAC CGCCAACAAA
GACATCAGCG CTTATACCGT ATACGAATCA CACCTGACCG GCATGTCGCT GAAATACCGG
GCCGTTGAGG AAATGAACCC TGGCCTGCGT TTTCCCAAAG TGATGATGAT TGATGAGCCT
GAACGGCTGG ATGCTGCCAT CGCCCGCATT CCACAGCAGG CATTCGAACG CTATACCATC
ATGAAAAGCG CCGCTTATTA CCTGGAGATT CTCGATAAGC GGGTCAACAA GGGGGAAGGC
GTCAAAATGT TGGCGGAGCA CCTGAACCTG AACCGCGACG AGGTCATGAC GCTGGGCGAT
CAGGAAAATG ATCTGGCGAT GATTGAGTAT GCCGGGTTGG GGGTTGCGAT GGGGAACGCC
ATCGAATCGG TCAAGGCGGC CAGTCAGTTT GTGACCCGTT CCAACAGTGA AGACGGCGTA
GCCTATGCGA TTGAAAAGTT CGTATTGAAT GCGGAGTAA
 
Protein sequence
MAIKLIAIDM DGTLLTPQNQ ISPAVKHAIT AAREKGVYVA LATGRPFIGV KRYLSELALR 
QDGHYCITNN GALVQRTLNG DCIAQTTLNF NDYLYFEAMS RELNVHFHAL DFDYVYTANK
DISAYTVYES HLTGMSLKYR AVEEMNPGLR FPKVMMIDEP ERLDAAIARI PQQAFERYTI
MKSAAYYLEI LDKRVNKGEG VKMLAEHLNL NRDEVMTLGD QENDLAMIEY AGLGVAMGNA
IESVKAASQF VTRSNSEDGV AYAIEKFVLN AE