| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3868 |
|---|
| Symbol | livF |
|---|
| ID | 8087253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 4483763 |
|---|
| End bp | 4484464 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644837959 |
|---|
| Product | leucine/isoleucine/valine transporter ATP-binding subunit |
|---|
| Protein accession | YP_002989443 |
|---|
| Protein GI | 242241262 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCAT TTAATCAGGT TTCCGCGCAC TACGGTAAAA TCCAGGCGCT GCATCAGGTT
AGCCTGCATA TCAACCAGGG CGAGATCGTG ACGCTGATCG GCGCCAACGG CGCGGGCAAA
ACCACACTGC TGGGTACGCT GTGCGGCGAA CCGCGTGCGT CCGCAGGTTC CATCGTGTTT
GATGGGAAGG ACATCACCGG CTGGCCGACG GCGCGCATCA TGCGTGAAGC CATCGCCATC
GTGCCGGAAG GTCGCCGCGT ATTTTCCCGC ATGACGGTGG AAGAGAATCT GTCGATGGGC
GGTTTTTTCG TCAAGCGCGA GCTGTATCAG CAGCGTATCG CACGGGTGTA CGAGCTGTTC
CCGCGACTGT TTGAACGCCG TACTCAGCGG GCGGGCACCA TGTCCGGCGG TGAACAACAG
ATGCTCGCCA TCGGCCGGGC ATTGATGAGC CAGCCGCGTC TGCTGTTGCT GGATGAACCG
TCGCTCGGCC TGGCGCCGAT CATCATCCAG CAGATCTTCG ACACCATCCA GCGGTTGCGC
GCAGAAGGCA TGACTATCTT CCTGGTGGAG CAGAACGCTA ACCAGGCACT TCGTCTGGCT
GATCGGGGTT ATGTGCTGGA AAACGGCCAT GTGGTACTAG AAGATACCGG TGCGGCATTA
TTAGCGAATG AAGCCGTGCG TTCCGCCTAT CTTGGCGGTT AG
|
|---|
| Protein sequence | MLSFNQVSAH YGKIQALHQV SLHINQGEIV TLIGANGAGK TTLLGTLCGE PRASAGSIVF
DGKDITGWPT ARIMREAIAI VPEGRRVFSR MTVEENLSMG GFFVKRELYQ QRIARVYELF
PRLFERRTQR AGTMSGGEQQ MLAIGRALMS QPRLLLLDEP SLGLAPIIIQ QIFDTIQRLR
AEGMTIFLVE QNANQALRLA DRGYVLENGH VVLEDTGAAL LANEAVRSAY LGG
|
|---|
| |