Gene Dd703_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3863 
Symbol 
ID8087248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4473896 
End bp4475578 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content57% 
IMG OID644837954 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002989438 
Protein GI242241257 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTCT TCAAAAACAT GAAACTGGCT ACCATGCTCG GCGCCGGTTT TGCCGTGGTA 
CTGATGATCA GTTTCTTCGT TTCTGCCTAC GGGCAATTTC AACTGCGGCA ACAGAGCAAT
AACGTGAATA ATCTGGCTAC CGACCAACTG GAAGGCTTAC TGCTGATTCA GGAATTGAAA
GATAACCTGA ACAGCGTCGC CATATCCGCA CGCAACCTGA CGCTGTTTAC CGCGCCGGAA
CAGGTTGCGC AGGAAAAACA GCTCATCAAC CAGACCATCG CCAAAAATAG CGACATTCTG
AAACGTGTGA CCGAGCTGGC CACCACTCCC AGAGAAAAAG CGTTGCTTGA TGCCATCAAC
CAAGTACGGC CGGTGAGCCT TGCCGCCACG CAAAAAGCCA TTGCACTCAG CCTGGATAAA
AAATATGACG ATGCCAAAAG CGTCATCATG AATGAAGTAC AACCGGCGCA GGCCAATTAC
TTTAAAGCCA TCAACGAGAT GGTGAGCTAT CAAAAAGGCG ATACCAGACA GGCAGCAGAT
GATGCCCGCC AGAACGCGCA AACCGCCGGT TTACTGATGC TGGTGTTATC CAGCATCTCA
ACCGTGCTGG GCACCGGCAT CGCCTGGCTG ATTACCCGCA GAATCAAAGG ACTGCTCGGC
GGCGAACCGG CTTACGCCTC GGATATTGCC CGCCAGATCG CCGCAGGCAA CCTGGCCATC
ACGGTTGAAC TGAAGCCGGG CGACGACACC AGCCTGTTGG CCGCCATGAA CGATATGCGC
TCCGGATTGA GCAATATTGT ACGGCAGGTT CACGACAGCA GCGCGTCCAT CTCTACCGGC
TCCAGCGAAA TCGCCATCGG CAGCAACGAC CTGAGCCGCC GCACCGAAGA GCAGGCCGCC
AGCGTCCAGG AAACCGCCGC GTCGATGGAG CAAATCAGCC AGACCATCCG CCAGAATGGC
GACACCGTGC GCGAAGCCGC TCAGCTTGCC GGCACCGCCA GCCAAACCGC CGCCAAAGGC
AACGACGTCG TCAACGACGT CATCACCACC ATGGCCGATA TCACCGCCAG TTCCCGTAAA
ATCGGCGATA TCATCACGGT GATTGACGGC ATCGCATTCC AGACCAACAT CCTGGCGCTG
AACGCTGCGG TGGAAGCCGC TCGTGCCGGC GAACAGGGTC GCGGCTTCGC GGTGGTAGCA
GGAGAAGTGC GCTCGCTGGC GCAGCGTTCG GCATCGGCCG CTCGCGAGAT CAAAGCGCTC
ATCACCACCA GCATGGAAAA AGTGGAAAGC GGCTCGCAAC TGGTGGGGCA TGCCGGCGAA
ACCATGAGCG ACATCGTCAA TCAGGCGCAG CACGTCGCTA ATCTCATCAA TGAAATCGGC
ATGACCACCC AGGAACAGGA ATCCGGCATT TCACAAATTA ATCAGGCCAT CACCCAGTTG
GATGGCGTCA CCCAGCAAAA TGCCGCGCTG GTTGAAGAAT CCGCCAGCGC CGCCGACAGT
CTGAACGATC AAGCGGCGAA ACTGGTGGAA CTGATGAGCG TCTTTACCAT TCAGCAAACC
CCTCCTCTGC GCCAGACTCA GCCGTCAGCC TCTCCGCGCA AGGCGGAAAA ACTGACGCCG
CCCAAAATCG CATTACGCAA ACCCGCGCCC GCCTCAGGCC ATGGTGACTG GGAAACGTTC
TGA
 
Protein sequence
MSLFKNMKLA TMLGAGFAVV LMISFFVSAY GQFQLRQQSN NVNNLATDQL EGLLLIQELK 
DNLNSVAISA RNLTLFTAPE QVAQEKQLIN QTIAKNSDIL KRVTELATTP REKALLDAIN
QVRPVSLAAT QKAIALSLDK KYDDAKSVIM NEVQPAQANY FKAINEMVSY QKGDTRQAAD
DARQNAQTAG LLMLVLSSIS TVLGTGIAWL ITRRIKGLLG GEPAYASDIA RQIAAGNLAI
TVELKPGDDT SLLAAMNDMR SGLSNIVRQV HDSSASISTG SSEIAIGSND LSRRTEEQAA
SVQETAASME QISQTIRQNG DTVREAAQLA GTASQTAAKG NDVVNDVITT MADITASSRK
IGDIITVIDG IAFQTNILAL NAAVEAARAG EQGRGFAVVA GEVRSLAQRS ASAAREIKAL
ITTSMEKVES GSQLVGHAGE TMSDIVNQAQ HVANLINEIG MTTQEQESGI SQINQAITQL
DGVTQQNAAL VEESASAADS LNDQAAKLVE LMSVFTIQQT PPLRQTQPSA SPRKAEKLTP
PKIALRKPAP ASGHGDWETF