Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3818 |
Symbol | |
ID | 8087203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 4433319 |
End bp | 4434992 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644837909 |
Product | Tail Collar domain protein |
Protein accession | YP_002989393 |
Protein GI | 242241212 |
COG category | [R] General function prediction only |
COG ID | [COG5301] Phage-related tail fibre protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAA AATATTTTGC CCTGCTGACA ACCACTGGCG CCGCGCTGCT GGCAAACGCT ACCGCGCTGG GGAAGCAGTT GTCTATCACC CAAATGGCGC TCGGCGACGG TGGCGGCACC CTGCCGACTC CCGACGCAGC ACAAACCAAA CTGGTCAACG AACGCCGCCG GGCGCCGTTG AACTCCCTGA GCGTTGACAC GACTAACACC AATCAGATTA TCGCTGAACA GGTTATCCCC GAGGACGAGG GCGGGTGGTG GATCCGGGAA ATCGGCTTGT ACGACGCAGC GGGCAATCTG ATCGCCGTCG CCAACTGCCC GGAAACCTAT AAACCGCTGC TACAGGAAGG CTCCGGCCGG GTGCAAACGG TGCGTATGAT TTTGATTGTC AGCAGCACCG ACGCGGTCAC GCTGAAAATC GATCCATCTG TAGTATTGGC GACCCGCAAG TACGTGGATG ACAGCGCGAT TGTGGTGAAA GCCTACGCCG ATGATGCGAT GGCGAAACAT CTCGCCGACG CCAATCCCCA TAAACAATAT GCCCCACTCG CCAGCCCGGC GTTGACGGGC ACACCCACCG CCCCAACAGC GGCAGCCGGT GCCAGTACCA CGCAGTTGGC TACCACTGCG TTTGTTTCTA CCGCAACGGC GAATCATGTC GCAGCGGCAA ATCCGCATCC TCAGTATGCG CCGCTTGCCA GCCCTGAGTT TACCGGGCGT GTAAAAGTAA CCGCTGATGG CGCCGGCGCC GTGTTACTCA AAGCTGCAAC TGCCAATGCT GCTGTAGGGA TATCGTTTCA GACCAATCTC GGTGTTCAGA TAGCGCAACT GACGTATGCC GGCACGAACA CGCAGTTTTA CAGCTACTTG GGTGGCAATA GCGTCGCGCT CATAGACAGC GGCGATATTA CTATTGCCCC TAAAGCAGGT CAGTCACTGA AAATTACCAC ACCAGTCACC GTCAACGGCG ACGGTAATCA AATCCTTTTG CAGCAGAGCA CAAAGGCACC ATCGTCTGGC TCGTATATTA AAGGGCTTAA CAGTGACGGC GTATTCTTGT GGACTGTCGG ACGTAGCGAA AGCAACGGCT GGCTTGAGCT GGGTGGCAAA GGGAGCAACC GCATCGCGTT GGCAGACAGC GGCGATGTCA CTATCGCCCC AGGAACTGGG AAAACCACAA AAATTACCAG CACGGCCACG CTCACCGCCC CGGCGGCGGG AGATAACAGC ACCAGCGCCA TTACATCGGG CTGGTTTGCA GCAGAGATTG CCGGCATCCC GCTGCCCTGG CCGCAAGCAA CCGCCCCCAC CGGCTGGCTG AAATGTAACG GTCAGTCGTT CGATAAAACC CTCTATCCCA AACTGACAGC AGCGTATCCG TCGGGCACAT TGCCGGATTT ACGCGGCGAG TTTATTCGCG GCTGGGATGA TGGGAGGGGG GTTGATAGCG GGCGTGCGGT GTTGTCTGTG CAGGATGCAA CGTGGATTCA GCCGAACATC GAAAGCAACA CTGCCGCGAC AACAATCAGA ATCGATAATG TCGATAGCAC GTTCAATACT GACGAGTATT CAGCGGTCAG TAATCTGCCG TCATATGAAC ATAACGGATC ACGGGCGCGT TCGTATGTTC GCCCCCGCAA CGTCGCCTTT AACTACATCG TGAGGGCTGC ATGA
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Protein sequence | MTTKYFALLT TTGAALLANA TALGKQLSIT QMALGDGGGT LPTPDAAQTK LVNERRRAPL NSLSVDTTNT NQIIAEQVIP EDEGGWWIRE IGLYDAAGNL IAVANCPETY KPLLQEGSGR VQTVRMILIV SSTDAVTLKI DPSVVLATRK YVDDSAIVVK AYADDAMAKH LADANPHKQY APLASPALTG TPTAPTAAAG ASTTQLATTA FVSTATANHV AAANPHPQYA PLASPEFTGR VKVTADGAGA VLLKAATANA AVGISFQTNL GVQIAQLTYA GTNTQFYSYL GGNSVALIDS GDITIAPKAG QSLKITTPVT VNGDGNQILL QQSTKAPSSG SYIKGLNSDG VFLWTVGRSE SNGWLELGGK GSNRIALADS GDVTIAPGTG KTTKITSTAT LTAPAAGDNS TSAITSGWFA AEIAGIPLPW PQATAPTGWL KCNGQSFDKT LYPKLTAAYP SGTLPDLRGE FIRGWDDGRG VDSGRAVLSV QDATWIQPNI ESNTAATTIR IDNVDSTFNT DEYSAVSNLP SYEHNGSRAR SYVRPRNVAF NYIVRAA
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