| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3774 |
|---|
| Symbol | |
|---|
| ID | 8087152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 4379525 |
|---|
| End bp | 4380451 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644837859 |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_002989350 |
|---|
| Protein GI | 242241169 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.694412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGA AAGCTGACTA TATCTGGTTC AATGGTGAAA TGGTTCCCTG GGCTGAGGCC
AAGGTTCATG TGATGTCCCA CGCGCTACAT TACGGGACTT CCGTGTTCGA GGGGGTTCGT
TGTTACAGTT CCCACCGTGG GCCGGTGGTA TTCCGTCACA GCGAGCACAT GCAGCGTCTG
CATGATTCGG CCAAGATTTA TCGCATGCCG ATCTCCTACA GTGTTGATGA ACTGATGGAG
GCCTGTCGCG AAACGCTGCG CAAAAATAAT CTGTCCAGTG CCTATATCCG TCCGCTGGTC
TTTGTCGGCG ATGTGGGTAT GGGCGTGAAT CCGCCGGCTG GCTACAAGAC CGACGTCATC
ATCGCGGCGT TTCCGTGGGG CGCCTATCTG GGAGAAGAAG CGCTGGATCA GGGGATAGAT
GCGATGGTGT CATCCTGGAA TCGTGCCGCG GCCAATACCA TTCCTACGGC AGCTAAAGCA
GGCGGCAATT ACCTGTCCTC CCTGCTGGTC GGCAGTGAAG CGCGTCGTCA TGGCTATCAG
GAAGGTATCG CGCTGGATGT GAACGGTTAC GTTTCAGAAG GCGCGGGCGA AAACCTGTTC
GAGGTAAAAG ACGGCATCCT CTTCACGCCG CCGTTCACGT CCTCCGCCCT GCCGGGGATC
ACCCGCGACG CCATTATCAA GCTGGCGAAG GACAAAGGCT TCGAAATCCG TGAACAGGTG
TTGTCGCGCG AATCGCTCTA TCTGGCGGAC GAAGTGTTTA TGTCCGGCAC GGCGGCGGAG
ATCACGCCGG TACGCAGTGT GGACGGCATT CAAGTCGGTA TCGGCAGATG CGGCCCGGTC
ACTAAACAAT TGCAGCAGGC GTTCTTCGGC CTGTTCAACG GCGAGACCGA AGACAAATGG
GGTTGGCTGG ATCCGGTAAA CCCGTAA
|
|---|
| Protein sequence | MTKKADYIWF NGEMVPWAEA KVHVMSHALH YGTSVFEGVR CYSSHRGPVV FRHSEHMQRL
HDSAKIYRMP ISYSVDELME ACRETLRKNN LSSAYIRPLV FVGDVGMGVN PPAGYKTDVI
IAAFPWGAYL GEEALDQGID AMVSSWNRAA ANTIPTAAKA GGNYLSSLLV GSEARRHGYQ
EGIALDVNGY VSEGAGENLF EVKDGILFTP PFTSSALPGI TRDAIIKLAK DKGFEIREQV
LSRESLYLAD EVFMSGTAAE ITPVRSVDGI QVGIGRCGPV TKQLQQAFFG LFNGETEDKW
GWLDPVNP
|
|---|
| |