| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3619 |
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| Symbol | tolC |
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| ID | 8088927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 4201279 |
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| End bp | 4202688 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644837696 |
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| Product | outer membrane channel protein |
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| Protein accession | YP_002989199 |
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| Protein GI | 242241018 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TGCTCCCTCT TCTTATCGGT CTGGGCCTGA GCGGTTTCAG CATCGCCAGC
CAGGCAGAGG ATTTGTTACA GGTTTATCAG CAGGCTAAAA CCACCAACCC GGAGTTGCGC
AGTTCCGCAG CCACCCGTGA CGCAGCATTC GAAAGAATCA ACGAAGCACG TTCTTCTCTG
CTGCCGCAGT TGGGTCTCGG CGCTGATTAT ACGCATAACA GTGGCTACCG TGACCGCAAT
AATGTCAACA GCAATGTCAA AAGCGCGTCA CTGCAACTCA CTCAGTCACT TTTCAACATG
TCATTGTGGA AAGCGCTGAC CCTGCAGGAA AAAACCGCAG GTATTCAGGA TGTGACTTAT
CAGACGTCGC AGCAGACGCT GATGCTCAAT ACCGCCACCG CCTATTTCAA CGTACTGCGC
GCCATCGATA ATCTTTCTTA CGTCAATGCG CAGAAGCAAT CCATCTACCG CGAACTGGAT
CAAACCACCC AACGTTTTAA CGTGGGTCTG GTTGCCATCA CCGATGTTCA GAACGCCCGG
GCGCAATATG ACAGCGTACT GGCGAGCGAA GTCACCGCAC GCAACAATCT GGATAACGCG
ATGGAAACCC TGCGTCAGGT GACGGGCAAT TTCTATCCGC AACTGGCGGG GCTGAACATT
GATCGACTGA ATCCGCAAAA ACCGGATGTC GTTAATAACC TGCTGAAAGA AGGTGAAAAT
CGTAACCTCA GCCTGTTGTC CGCTCGCTTG AGCCAGGATT TGGCCCGCGA GCAGATTCGC
TCCGCGGAAA CCGGCCATAT GCCGACGCTG TCCCTGACGG CATCCTCAGG CATCACCAAT
ACCCGCTACT CCGGCTCTAA AGCCGTCGGC AGCAGTTTCA GCGATAGCGA TGTCGGCCAA
AATCAGGTTG GGCTGAGCTT CTCTCTGCCG CTTTACAGCG GCGGCGGCAC AAGCTCTCAG
GTGAAACAAG CACAATATAA CTATGTTGCC GCCAGCGAGA ACCTGGAAAG CGCCCATCGT
TCCATGATTC AGACGCTGCG TTCCGCCCAC AACAACGTTT CCGCCTCCAT TAGCAGCATC
AACGCCTACA AGCAGGCGGT GATTTCCGCA CAAAGCTCGC TGGATGCGAT GGAAGCCGGT
TATCAGGTCG GTACCCGCAC CATCGTGGAT GTTCTGGACG CAACGACGAC CCTGTATAAC
GCCAAACAGC AACTTTCAGG CGCCCGCTAT GACTACCTGG TCAACCAGCT GAACCTGAAA
CAGGCGTTGG GTACGCTGAA TGAAGATGAT CTGAAATCGC TCAACGGTAT GCTGGGCAGC
GCAGTCTCTA CCACGCCAGC CATCACCGAC GACAGCGTGC CGACGCCAGT TACGCAAGGC
GCGGCTAAAA CCAGTAAGGC TAAACGCTAA
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| Protein sequence | MKKLLPLLIG LGLSGFSIAS QAEDLLQVYQ QAKTTNPELR SSAATRDAAF ERINEARSSL
LPQLGLGADY THNSGYRDRN NVNSNVKSAS LQLTQSLFNM SLWKALTLQE KTAGIQDVTY
QTSQQTLMLN TATAYFNVLR AIDNLSYVNA QKQSIYRELD QTTQRFNVGL VAITDVQNAR
AQYDSVLASE VTARNNLDNA METLRQVTGN FYPQLAGLNI DRLNPQKPDV VNNLLKEGEN
RNLSLLSARL SQDLAREQIR SAETGHMPTL SLTASSGITN TRYSGSKAVG SSFSDSDVGQ
NQVGLSFSLP LYSGGGTSSQ VKQAQYNYVA ASENLESAHR SMIQTLRSAH NNVSASISSI
NAYKQAVISA QSSLDAMEAG YQVGTRTIVD VLDATTTLYN AKQQLSGARY DYLVNQLNLK
QALGTLNEDD LKSLNGMLGS AVSTTPAITD DSVPTPVTQG AAKTSKAKR
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