Gene Dd703_3586 details

Gene Information

• Locus tag: Dd703_3586
• ID: 8088894
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: -
• Start bp: 4162059
• End bp: 4162706
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644837663
• Product: CRISPR-associated protein, Cse3 family
• Protein accession: YP_002989166
• Protein GI: 242240985
• TIGRFAM ID: [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTTT CCCGGGTCAC GCTGCAACCG GCGGCGCTGC CGTCGGTCAT GGCGGAGAAA 
TGGCAGACCA CGCCGGTCTA TGCCAGCCAC CAGTGGTTGT GGCAACTGTT CCCGCAAGAA 
GGATCGCGCG GCTTTCTGTT TCGGCAAGAC GACCATGCGA CGCTTAGCCG CTATTACCTG 
CTCTCGGCCT GTGCGCCCCG CCAGGATCAC AACCTGTTTG TGGTGGAAAC CAAACCCTGG 
CAACCGCAAC TGAACGCCGG GATGCCACTG GCGTTTTCCC TGCGCGCCAA TCCGGTGGTG 
ACGCGCCGGC AAAAGCGGTG CGATGTGCTG ATGGACGCCA AATATCACGC CAAAGCGCAG 
GGTGCGGACT CAGCGGAAAT TTGGCCGCGC CAACAGCAGG CCGCCGTCGA CTGGCTGGTT 
AGGCAGGGCG AACGCGGCGG GTTTGCGGTA CATGCTTGTC ACGTTGACGG TTATCAACGC 
CATCGGTTGT ATAAACCGCA GCAGAGCGGG CCGGTCAGTT TCAGTTCGGT GGACTTTGAC 
GGCTTACTGC GTATCACCGA CGCGAAGCGT TTTGCCGAGA CGGTGAGCCA AGGGCTGGGG 
AAAAGCCGGG CGCTGGGGTG CGGGCTGTTG TTGCTACGCC GGGCCTGA 

 

Protein sequence

MFFSRVTLQP AALPSVMAEK WQTTPVYASH QWLWQLFPQE GSRGFLFRQD DHATLSRYYL 
LSACAPRQDH NLFVVETKPW QPQLNAGMPL AFSLRANPVV TRRQKRCDVL MDAKYHAKAQ 
GADSAEIWPR QQQAAVDWLV RQGERGGFAV HACHVDGYQR HRLYKPQQSG PVSFSSVDFD 
GLLRITDAKR FAETVSQGLG KSRALGCGLL LLRRA