Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3466 |
Symbol | |
ID | 8089420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 4035069 |
End bp | 4036658 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644837544 |
Product | peptide chain release factor 3 |
Protein accession | YP_002989048 |
Protein GI | 242240867 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCCAA GTGAATATGC TTGCGAAGTC TCGAAACGGC GGACTTTCGC TATTATTTCC CACCCTGACG CCGGTAAAAC CACCATTACT GAAAAGGTTC TGCTGTTCGG ACAGGCCATC CAGGTCGCCG GTACGGTAAA AGGCCGCGGC TCCAACCAGC ATGCCAAGTC GGACTGGATG GAAATGGAAA AACAGCGCGG GATATCTATT ACCACCTCGG TGATGCAGTT TCCGTATCAG GAATCTCTGG TCAACCTGCT GGATACCCCT GGACATGAAG ACTTTTCGGA AGATACGTAC CGCACGCTGA CGGCGGTGGA CTGCTGCCTG ATGGTGATCG ACGCCGCCAA GGGCGTTGAG GATCGCACCC GTAAGCTGAT GGAAGTGACG CGCCTGCGTG ATACGCCAAT CCTGACTTTC ATGAATAAAC TGGATCGTGA CATTCGCGAT CCGATGGAAT TGCTGGATGA AGTGGAAAAC GAACTGAACA TCGCCTGTGC GCCGATCACC TGGCCGATCG GCTGCGGTAA GTTGTTCAAA GGGGTGTACC ACCTCTACAA GGATGAAACC TATCTCTATC AAAGCGGTAT GGGTCATACC ATCCAGGAAG TGCGTATCGT CAAGGGGCTG GATAACCCGG AGCTGGAGCA AGCGGTGGGC GAGGATTTGG CCGCCCAGTT GCGCGAAGAG CTGGCGTTGG TGAAAGGCGC GTCCCATGAG TTTGAACTGG ATGCGTTTTT GGAGGGGGAG TTAACGCCGG TCTTTTTCGG CACCGCGCTG GGTAACTTTG GCGTCGACCA CATGCTGGAC GGTCTGGTGG CCTGGGCGCC TGCGCCGATG CCGCGTCAGA CTGACGCGCG CGTGGTGAGC GCCGATGAAG AGAAATTCAG CGGTTTTGTG TTTAAGATTC AGGCCAATAT GGATCCGAAA CACCGCGACC GAGTGGCATT CATGCGTGTG GTCTCCGGCC GTTACGAGAA AGGGATGAAA CTGCGTCAGG TGCGCACCGG CAAGGACGTC ATCATCTCCG ATGCGTTGAC GTTCATGGCG GGCGACCGTT CCCATGTGGA AGAAGCGTAT CCGGGCGATA TCATCGGGTT GCACAACCAC GGTACGATTC AGATTGGCGA TACCTTCACC CAGGGCGAGG ATCTGAAGTT TACCGGTATC CCGAACTTTG CGCCGGAACT GTTCCGCCGC ATCCGGCTGC GTGATCCGCT CAAACAGAAA CAGCTGCTGA AAGGGCTGGT GCAGCTGTCG GAAGAAGGCG CGGTGCAGGT GTTCCGTCCG CTGATCAACA ACGATCTGAT CGTGGGCGCG GTCGGCGTGC TGCAGTTTGA CGTCGTGGTA TCCCGTCTCA AAACCGAATA CAACGTGGAA GCGGTGTATG AATCGGTGAA CGTGTCCACC GCCCGTTGGG TGGAGTGCGG CGATGCGAAG AAACTCGAGG AGTTCAAGCG TAAGAACGAA TTGCATCTGG CGCTGGATGG CGGCGACAAC CTGACGTATG TCGCGCCGAC CATGGTGAAC CTCAACCTGA CGCAGGAACG TTACCCAGAC GTACAGTTCC ACAAAACCCG CGAACATTAA
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Protein sequence | MSPSEYACEV SKRRTFAIIS HPDAGKTTIT EKVLLFGQAI QVAGTVKGRG SNQHAKSDWM EMEKQRGISI TTSVMQFPYQ ESLVNLLDTP GHEDFSEDTY RTLTAVDCCL MVIDAAKGVE DRTRKLMEVT RLRDTPILTF MNKLDRDIRD PMELLDEVEN ELNIACAPIT WPIGCGKLFK GVYHLYKDET YLYQSGMGHT IQEVRIVKGL DNPELEQAVG EDLAAQLREE LALVKGASHE FELDAFLEGE LTPVFFGTAL GNFGVDHMLD GLVAWAPAPM PRQTDARVVS ADEEKFSGFV FKIQANMDPK HRDRVAFMRV VSGRYEKGMK LRQVRTGKDV IISDALTFMA GDRSHVEEAY PGDIIGLHNH GTIQIGDTFT QGEDLKFTGI PNFAPELFRR IRLRDPLKQK QLLKGLVQLS EEGAVQVFRP LINNDLIVGA VGVLQFDVVV SRLKTEYNVE AVYESVNVST ARWVECGDAK KLEEFKRKNE LHLALDGGDN LTYVAPTMVN LNLTQERYPD VQFHKTREH
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