| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3344 |
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| Symbol | |
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| ID | 8089294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 3916057 |
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| End bp | 3917013 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644837420 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002988928 |
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| Protein GI | 242240747 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCGTC CTCGTCGTCG TGGTCGAGAT ATTCATGGGG TGTTGCTGCT TGATAAACAG
CAGGGGGCTT CATCCAATGA TGTACTGCAG AAAGTAAAAC GGATTTTTAA CGCCAACAAA
GCGGGACATA CCGGCGCACT GGATCCGTTA GCGACCGGGA TGCTGCCTAT TTGTCTGGGG
GAAGCGACCA AATTTTCCCA GTACCTATTA GATTCCGACA AACGTTATCG GGTAATTGCT
CGTTTGGGGC AACGTACTGA TACGTCTGAC GCGGATGGCA ACTTGATTGA GACTCGCCCG
ATCGCGTTTT CCGCCGATGC ACTGAACCAG GCGTTGGATA GTTTTCGGGG AACGACGCTG
CAGGTGCCTT CCATGTATTC GGCGTTGAAA TATCAGGGAC GACCGCTGTA TGAGTATGCC
CGGCAAGGCG TGGTTGTACC GCGTGAAGCG CGTGAAATCA CGGTGTATGA ATTGCAGTTT
ATCCGCTGGG AAGCCGAAGA GCTTGAGCTG GAAATTCACT GTTCCAAAGG AACTTATATT
CGTACCATTA TTGACGATTT GGGCGAAAAA CTGGGTTGTG GCGCGCATGT GAGTTTTCTG
CGCCGTTTGC AAGTAGCCAC TTATCCGGTT GAACAGATGG TAACGTTGGA ACGTTTACAA
CAGTTGCAGG CTCAGGCTGA GGAAGCGGGT CGGCCGATCG GTGAAGTGCT GGATAGCCTA
TTATTGCCGA TGGACAGTCC CGCACAGGCA TTTCCCGTCG TCAACTTGTC CGCTGTTGCC
GCCGGGTACT TAAAGCTGGG GCAACCCGTT CGCGCGCCGG GCGTACCTTC TTCCGGGCTG
GTTCGTATCA CTGAAGGCGA TGCGCATAAA TTTATTGGTA TGGGTGAAAT AGATGCTGAA
GGTCGCGTCG CTCCGCGCAG GCTGGTTGTT GAAATGCCAG CAGTCATTGA CGTGTGA
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| Protein sequence | MGRPRRRGRD IHGVLLLDKQ QGASSNDVLQ KVKRIFNANK AGHTGALDPL ATGMLPICLG
EATKFSQYLL DSDKRYRVIA RLGQRTDTSD ADGNLIETRP IAFSADALNQ ALDSFRGTTL
QVPSMYSALK YQGRPLYEYA RQGVVVPREA REITVYELQF IRWEAEELEL EIHCSKGTYI
RTIIDDLGEK LGCGAHVSFL RRLQVATYPV EQMVTLERLQ QLQAQAEEAG RPIGEVLDSL
LLPMDSPAQA FPVVNLSAVA AGYLKLGQPV RAPGVPSSGL VRITEGDAHK FIGMGEIDAE
GRVAPRRLVV EMPAVIDV
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