Gene Dd703_3198 details

Gene Information

• Locus tag: Dd703_3198
• ID: 8089143
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 3749832
• End bp: 3751775
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644837272
• Product: ABC transporter related
• Protein accession: YP_002988784
• Protein GI: 242240603
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0833808
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAC CTCTGCTGCA ACTACGCCAG CTGCATCGCA GCTTCCAGAA TGGCGAACAA 
CGGGTTGATG TACTGAAAGA CATCAACCTG ACGATCCGGC ACGGCGAGAT GGTGGCTATC 
GTTGGGGCGT CCGGTTCGGG TAAATCCACC CTGATGAACA TCCTCGGTTG TCTCGACAAA 
CCGACCGCCG GCGATTATCA GGTGGCGGGC ACCTCGGTGC TGACGCTGGA CAGCGATCGG 
CTGGCGGCAT TACGGCGCGA GCACTTCGGC TTCATTTTTC AGCGTTACCA TCTGCTTAAC 
GACCTGAGCG TGCGCGACAA CGTCGAGATC CCGGCCATTT ACGCCGGCGT AGCGCGTCAT 
GAACGACAAC AACGCGCCGG CGCTCTGCTC ACTCGCCTGG GGCTGGCGGA TAAGCTTGGC 
AACTCGCCCA ACCAACTTTC CGGCGGCCAA CAACAACGGG TCAGCATCGC TCGTGCACTG 
ATGAACGGCG GGCAGGTGAT CCTGGCGGAC GAGCCCACCG GCGCGCTGGA CAGCGCCAGC 
GGCCAGGAAG TGTTGTCGAT CCTCCGGGAA CTGCACCAGC AAGGCCACAC CATCATTATC 
GTGACCCACG ATATGCGTAT CGCTCAGATG GCCGAGCGCA TTATCGAAAT CTGCGATGGA 
GAAATCATCG CCGATCGCCG GCTGGACGGC GATTCTCACG CCACATTACG TTCCTCATCC 
GCCGCCACCA ACAGGCCGCT CACCGGTTGG TACGATCGCC TGCAAAACGC CTTCAAGATG 
GCGTTGCGGG CCATGAATGC CCAACGGATG CGCACCTTCC TCACCATGCT GGGGATCATT 
ATCGGCATCG CTTCGGTGGT ATCGGTCGTG GCACTGGGCA AAGGCTCCCA GCAACAAGTG 
TTGGAGCATA TCAACGCCAT GGGAACCAGT ACGCTGGAGA TCTTCCCCGG CAAAGGGTTC 
GGCGATATGC GTTCCGGCGC AATCCAGACC TTGCGCATCA ACGATCTGCG CCCACTGGAA 
CAGCAACCCT ATATCCACAG CGTGACCCCG ACGGTGTCGA CCTCGATCAC GCTGCGCTAC 
GCCAACAAAG CGGTATCCGC CAGCGTCAAC GGCGTCGGCG AACAGTTTTT TACCGTGCGC 
GGTTACACAC TGACGACCGG CAACCGTTTT ACTGCGCTTA GCGTCGAGCG TCTGGCGCAG 
GAAGCGGTCA TCGATCAAAA CACGCGCGAC AAGCTGTTCC CGCATGGCGA AAACCCGCTG 
GGACAGGTGA TCTTCCTCGG CACGTTGCCC TGCCGCATCA TCGGCGTAGC CACCAAGACC 
CAATCGGGGT TCGGCAGCGA TGAGAATCTC AACATCTGGC TGCCTTACAC CACGGTAATG 
CGCAGGATGG TCGGCCAATC GTACCTGCGT AGTATTACCG TGCGGGTCAA GGACAACGTC 
GATCTGAGCG TGGCGGAACA GGGCATTACC CAGGTGCTGA CCCGTCAACA CGGTAGCCAG 
GACTTCTTCG TCATGAACAC CGACAGTATC CGGCAAACCA TCCAGAAGAC GACCGCCACC 
ATGACGCTAT TGGTTTCCGC CATCGCGCTG ATTTCGTTGA TTGTCGGCGG TATTGGCGTC 
ATGAACATCA TGCTGGTATC GGTGACGGAG CGTACCCGAG AGATTGGCGT GCGGATGGCG 
GTCGGGGCCA GAACCGGCGA TATCATGCAA CAGTTTCTGA TTGAGGCGGT GCTGGTATGC 
CTGTGCGGCG GGGTGATCGG CGTGATCCTG GCGTTACTGG CCGGCACCGT CGCCAGCCAT 
CTGAGCAGTG TCACCATGAT CTATTCAGCC ACGTCGATGG TGGTGGCGTT TGTGTGTTCC 
AGCCTGATTG GCGTGATATT CGGCTTTTTC CCGGCGCGCC GCGCCGCGCA GTTGCAACCG 
ATCCACGCGC TGGAGCGGGA ATAA 

 

Protein sequence

MSEPLLQLRQ LHRSFQNGEQ RVDVLKDINL TIRHGEMVAI VGASGSGKST LMNILGCLDK 
PTAGDYQVAG TSVLTLDSDR LAALRREHFG FIFQRYHLLN DLSVRDNVEI PAIYAGVARH 
ERQQRAGALL TRLGLADKLG NSPNQLSGGQ QQRVSIARAL MNGGQVILAD EPTGALDSAS 
GQEVLSILRE LHQQGHTIII VTHDMRIAQM AERIIEICDG EIIADRRLDG DSHATLRSSS 
AATNRPLTGW YDRLQNAFKM ALRAMNAQRM RTFLTMLGII IGIASVVSVV ALGKGSQQQV 
LEHINAMGTS TLEIFPGKGF GDMRSGAIQT LRINDLRPLE QQPYIHSVTP TVSTSITLRY 
ANKAVSASVN GVGEQFFTVR GYTLTTGNRF TALSVERLAQ EAVIDQNTRD KLFPHGENPL 
GQVIFLGTLP CRIIGVATKT QSGFGSDENL NIWLPYTTVM RRMVGQSYLR SITVRVKDNV 
DLSVAEQGIT QVLTRQHGSQ DFFVMNTDSI RQTIQKTTAT MTLLVSAIAL ISLIVGGIGV 
MNIMLVSVTE RTREIGVRMA VGARTGDIMQ QFLIEAVLVC LCGGVIGVIL ALLAGTVASH 
LSSVTMIYSA TSMVVAFVCS SLIGVIFGFF PARRAAQLQP IHALERE