| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3189 |
|---|
| Symbol | |
|---|
| ID | 8089134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 3741121 |
|---|
| End bp | 3741891 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644837263 |
|---|
| Product | protein of unknown function DUF540 |
|---|
| Protein accession | YP_002988775 |
|---|
| Protein GI | 242240594 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2981] Uncharacterized protein involved in cysteine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000074726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACA AACAACAAGT TGATAATTCA CGCAGTGGTT TCCATTACTT CATGAAAGGC
TGGGAATTAC TTGCTCTTCC CGGTATCCGC CGCTTTGTCA TCCTTCCCTT GCTGGTCAAC
ATCCTGTTGA TGGGCGCGGC GTTCTGGTGG CTGTTCCACC AATTGGGAAC CTGGATTCCT
CTGTTGATGA GCCACATCCC CGACTGGCTG CAATGGCTCA GCTATCTGAT CTGGCCTCTG
GTGACGGTTT CTATCCTGCT GGTATTCAGC TACTTTTTCA GCACCATCAC CAACTTGATC
GCAGCGCCGT TTAACGGCTT ATTGGCAGAA CAGCTGGAAG CACGTCTGAC CGGCCATACG
CCGCCCTCAA GCGGATTACT GGATATCCTT AAAGACGTTC CTCGCATCAT GCGACGCGAA
ATGCAGAAAT TGGCCTATTA TTTACCCAGG GCGTTGGTGC TCGTTCTGCT CTACTTTATT
CCCGGCATAG GCCAGACGCT GATTCCCGTA ATCTGGTTCC TGTTCAGCGC CTGGATGCTG
GCGGTGCAAT ATTGCGACTA CCCTTTTGAT AACCACAAGA TCAGTTTCCC GGTCATGCGG
CAAGCGCTGC GTCAGCATAA AATCGCCAAT CTACAGTTGG GTTCGCTGAT CAGCCTGTGC
ACCATGGTGC CGCTGCTCAA TTTGCTCATC ATGCCGGTCG CTGTATGCGC TGCAACCTCC
ATGTGGGTTG ATCGTTATCG TCATCTTTCC GCCACGGCGA ATAGACGCTA A
|
|---|
| Protein sequence | MTHKQQVDNS RSGFHYFMKG WELLALPGIR RFVILPLLVN ILLMGAAFWW LFHQLGTWIP
LLMSHIPDWL QWLSYLIWPL VTVSILLVFS YFFSTITNLI AAPFNGLLAE QLEARLTGHT
PPSSGLLDIL KDVPRIMRRE MQKLAYYLPR ALVLVLLYFI PGIGQTLIPV IWFLFSAWML
AVQYCDYPFD NHKISFPVMR QALRQHKIAN LQLGSLISLC TMVPLLNLLI MPVAVCAATS
MWVDRYRHLS ATANRR
|
|---|
| |