Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3178 |
Symbol | |
ID | 8088475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 3728470 |
End bp | 3729426 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644837252 |
Product | cytochrome c nitrite reductase, NrfD subunit |
Protein accession | YP_002988764 |
Protein GI | 242240583 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.15313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATAACG CCTTCCATTT CAGTTCCCTG GTCTGGGACT GGCCGATTGC CGTCTACTTG CTGCTGGTGG GGATCTCATC CGGCATGCTG GTGCTGACGC TGCTGTTCCG TCGCTATCTG CCCGCGGAGA ACCAGCACGC CAACCCGTTG ATTGCCGCCA CGGCGATCAT CGCGCCGCTG TCGGTGGTCG TCGGGCTGGT GATCCTGATA TTCCACCTCG CCCGCCCCGT CACCTTCTGG TACCTGATGG TCTTCTATAA CCCCGGTTCC ATTATGTCGT TGGGAGTGAT GCTGTTTCAG GTGTACATGC TGGTGCTGTT CCTGTGGCTG GCCAGTCTGT ACCAACAACC GCTGCTGGCC TGGAGCGCTC GCCATCTGCC GGGCGCCCTG CACGGTTTGC TGAACGGCGT CATTACGCGA GTGACCCGCG GCATGCGGCC GGTGGAAAAT CTGCTGCTGG TGCTGGCGTT GCTGCTCGGC TGTTATACCG GTTTCCTGCT CTCGGCGTTG AAATCCTTTC CGCTACTGAA TAACCCGGTG TTGCCGGTGC TGTTTTTGGT CTCCGGCGTC ACCTCCGGGG TCGCGGTGCT GATGATGGTC GGCACATCGG CGCGTTGCCG CCGCGCCTGC CCGCAAACGT TGCACCTACT GCATGCGCTG GAAAAACCGA TCGCGCTGAT CGAACTGTTC CTGCTGTTCG CTTTCTTCAT CGGTTTGCTG CTGGGCGGCG GCCAGAAGAC GGTAGCGGCG CAGGTGGCGC TGAGCGGCTT CTGGGGCGGC GTGTTCTGGA TCGGGATTAT CGGCATCGGC ATGCTGGCGC CATTGGCGGC GGGCAGCCTG CCGGCACGAC GTCGTAGTAG TCCGCACCTG CCGCGGATTG CCGCCGGCCT GACGTTGCTG GGCGTGTTCC TGTTGCGCCT GTTCGTACTG TACGCCGGGC AGATGACGGT GGCCTGA
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Protein sequence | MHNAFHFSSL VWDWPIAVYL LLVGISSGML VLTLLFRRYL PAENQHANPL IAATAIIAPL SVVVGLVILI FHLARPVTFW YLMVFYNPGS IMSLGVMLFQ VYMLVLFLWL ASLYQQPLLA WSARHLPGAL HGLLNGVITR VTRGMRPVEN LLLVLALLLG CYTGFLLSAL KSFPLLNNPV LPVLFLVSGV TSGVAVLMMV GTSARCRRAC PQTLHLLHAL EKPIALIELF LLFAFFIGLL LGGGQKTVAA QVALSGFWGG VFWIGIIGIG MLAPLAAGSL PARRRSSPHL PRIAAGLTLL GVFLLRLFVL YAGQMTVA
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