Gene Dd703_3165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3165 
Symbol 
ID8088462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3714810 
End bp3715724 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content57% 
IMG OID644837239 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002988751 
Protein GI242240570 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.46622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA CCGACGACTT GCTGTTTTTC AGCCGTATCG CCGCATTGGG CAGCCTGACC 
GCTGTTGCGC GCGAACAGGG GCTTTCGCTG CCGGCAGTGA GCAAACGCCT GACCCAGTTG
GAACAACGGT TGGGCGTGCA GTTGATCCGG CGTACCACCC GACGGTTGGA TCTGACGTCG
GAAGGTCAGT TATATGCGGC AGGCGCGTTG CCCATCCTGA ATGAGATTGA GGCGCTGGAA
GGTGTGGTGC GGCGCAACCA GTTGGCACTG CGCGGTCGGC TAACGATCAA TGCATCCTTT
GGATTCGGCC GACGCTATAT TGCCCCGTTG ATCTCCTCCT TTTCGTTGCA ACATCCTGAT
CTGGATATCC AGCTACAACT GACCAGCCAG CCGCTCAATA TGCCGGACAG CGCCGTGGAT
ATTGATATCC GGTTCGGCGA GCCGCCGGAT TCACGGCTGG TGGCCCACCG TTTGATGAAA
AATCCGCGGG TACTCTGCGC GGCGCCGGCC TATTTGGCGC GGGCGGGCAT TCCCCTCAAT
GTGACGGATC TGGCCAATCA TAACTGCCTG ATATTGAGAC AATATGAGAG CGATTATGGT
CTGTGGCGGT TTTATCGCGA TGGTCAGGAA TATACCCACC GGGCGTTCGG CAATCTTTCC
AGCAACGATG GTGAGGTGAT CATGCGCTAT GCGCGAGATG GGCACGGCAT TATTCTGCGT
TCCCACTGGG ATGTCAGCCC CTGGCTGGCG CGAGGGGAAC TGGTCGGGTT ATTGACGGAA
TATACGATCC CCGGTGCAGA TGTGTATGCG GTTTATCAAC ATCGTCGTCA TGTTCCGGCG
CGTATTACCG CGTTTATCGG CTGGCTCAAA ACGCACTTGC CCGTCATCAG CGCTGAACCT
GGCGCTGATG ACTGA
 
Protein sequence
MSATDDLLFF SRIAALGSLT AVAREQGLSL PAVSKRLTQL EQRLGVQLIR RTTRRLDLTS 
EGQLYAAGAL PILNEIEALE GVVRRNQLAL RGRLTINASF GFGRRYIAPL ISSFSLQHPD
LDIQLQLTSQ PLNMPDSAVD IDIRFGEPPD SRLVAHRLMK NPRVLCAAPA YLARAGIPLN
VTDLANHNCL ILRQYESDYG LWRFYRDGQE YTHRAFGNLS SNDGEVIMRY ARDGHGIILR
SHWDVSPWLA RGELVGLLTE YTIPGADVYA VYQHRRHVPA RITAFIGWLK THLPVISAEP
GADD