| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3161 |
|---|
| Symbol | |
|---|
| ID | 8088458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3710976 |
|---|
| End bp | 3711482 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644837235 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002988747 |
|---|
| Protein GI | 242240566 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2862] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.604205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGTT TCCTTGAAAA TACGATGTAT GCGGCTCGCT GGGTATTAGC GCCGGTTTAT
CTTGGTTTAT CGCTGGGCTT GATAGCGTTG GCGATCAAGT TTTTTGAAGA GATCTGGCTG
GTATTGCCGA ATGTGTTTTC CATCGCCGAG TCCGACCTGA TCCTGATGCT GCTTTCGATG
GTGGATATGA CGCTGGTCGG CGGCCTGCTG GTGATGGTGA TGTTCTCCGG TTATGAGAAC
TTTGTGTCGG CGCTGGATAT CGGTGAGGAC AAGGAAAAAC TCAACTGGTT GGGCAAAGTC
GACTCCGGTT CGCTGAAAAA CAAAGTCGCG GCGTCGATTG TCGCCATTTC CTCCATCCAT
CTGCTGCGGG TCTTTATGGA TGCCAAAAAC GTTCCGGATA ACAAGCTGAT GTGGTATGTG
ATTATCCATC TGACGTTTGT GCTGTCGGCG TTCGTTATGG GCTATCTCGA CCGATTGTCC
CGTCAGGATA AAAACGCCGC CCACTAA
|
|---|
| Protein sequence | MERFLENTMY AARWVLAPVY LGLSLGLIAL AIKFFEEIWL VLPNVFSIAE SDLILMLLSM
VDMTLVGGLL VMVMFSGYEN FVSALDIGED KEKLNWLGKV DSGSLKNKVA ASIVAISSIH
LLRVFMDAKN VPDNKLMWYV IIHLTFVLSA FVMGYLDRLS RQDKNAAH
|
|---|
| |