Gene Dd703_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3106 
Symbol 
ID8088403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3644021 
End bp3645292 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content57% 
IMG OID644837183 
Productalanine racemase domain protein 
Protein accessionYP_002988695 
Protein GI242240514 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATTC ATTTTCCTCT CCAGGCCGAC GGTTTACTGG ATGCGCAGCA GCCGGCGCCA 
CGTTTTAAAT CGGTAGCGGG GTCAGGCAAT GCGCCTCTGG CTATGGGGAC GTCGATATTC
AACAGCGATC AGGTATTTTC GCCGCTGATG GTCATGAAAC AGTCCGCGCT GGAGCATAAC
CTGCGGCAAC TGGCGGCCTT TTGCCGGGAA AACGGCGTAC TGCTGGCCGC GCACGGTAAA
ACGTCTATGT CTCCCGCCAT TCTGCGCCGG GCGATCACTG AAGGCGGCGC CTGGGGACTG
AGTGCGGCAA CACCCGCTCA GGTACGTGCT TTACGCCAGT TTGGTATTCG GAATGTGTTG
CTGGCCAATG AACTGGTCGA CCCGGCCGGC ATTCGCTGGG TCGCGCAATA TCAGCAGCAG
CATCCCGAAC ACGATTTTCT CTGTTATGTC GATTCATTAC AGGGCGTAAA ACTGTTGTCG
CAACATCTGG GCAGTACCCC TATTTCGGTA TTGCTGGAAA TGTCCGTGAG TGGTGGTCGT
ACCGGTTGCC GTTCGCTACA AGACGCACTG GCCATTGCCC GTGCGGTTGC CGCCACGCCT
TCACTGCAGT TGGTGGGGGT CGCCGGTTAT GAGGGGGCGC TTGGCGCTGG CCGCGATACA
GCCGGTATTC AACGGGTGAA AGATTACTGT GCAATGATGA TCGATACGGC TGCACGGCTG
GCGGAAGAAA AACTGTTCAG CCGTCATCAC ATCATTCTCA GTGCCGGTGG CGGTGCATGG
TTTGATGTCG TGACGGCGTG CTTTGTGGCG GCAAAACTAC CGTTGCCGGT GACGCCGTTG
ATTCGTTCCG GCGCGTATAT GGCGCACGAC TGCGGGCTCT ACGCGCGTAT TGCGCCTTTC
TCACAGGCAG GGACGACCCA TCATTTCACC GCGGCGCTGG AGATTTGGGG GCGAGTATTA
TCACGCCCGG AAGCCGGGTT GGCCTTTGTT GATTTTGGCC GCCGCGATGT GCCGTTCGAT
CAGGATTTAC CCAACCCGCT GTGGATACGC AATGCTGATG GCCATGCGCC ACGCGCGGCG
ACCCATCTGC GCATCAGTGA CATTAATGAT CAACATGCCT ATGTGTTGCT GCCGGAAGAT
GAAAAACTGC AGCCTGGCGA TTGGCTGGGG TGTGGTATAT CGCATCCGTG TACAGCCTTT
GATAAATGGC GCTATTTGCC CTTGGTGGAC GATGACTATT GCGTCACGGA TTCACTGGAA
ACGGCATTCT GA
 
Protein sequence
MSIHFPLQAD GLLDAQQPAP RFKSVAGSGN APLAMGTSIF NSDQVFSPLM VMKQSALEHN 
LRQLAAFCRE NGVLLAAHGK TSMSPAILRR AITEGGAWGL SAATPAQVRA LRQFGIRNVL
LANELVDPAG IRWVAQYQQQ HPEHDFLCYV DSLQGVKLLS QHLGSTPISV LLEMSVSGGR
TGCRSLQDAL AIARAVAATP SLQLVGVAGY EGALGAGRDT AGIQRVKDYC AMMIDTAARL
AEEKLFSRHH IILSAGGGAW FDVVTACFVA AKLPLPVTPL IRSGAYMAHD CGLYARIAPF
SQAGTTHHFT AALEIWGRVL SRPEAGLAFV DFGRRDVPFD QDLPNPLWIR NADGHAPRAA
THLRISDIND QHAYVLLPED EKLQPGDWLG CGISHPCTAF DKWRYLPLVD DDYCVTDSLE
TAF