Gene Dd703_3009 details

Gene Information

• Locus tag: Dd703_3009
• Symbol: recC
• ID: 8089844
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: -
• Start bp: 3505320
• End bp: 3508706
• Gene Length: 3387 bp
• Protein Length: 1128 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644837093
• Product: exonuclease V subunit gamma
• Protein accession: YP_002988606
• Protein GI: 242240425
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1330] Exonuclease V gamma subunit
• TIGRFAM ID: [TIGR01450] exodeoxyribonuclease V, gamma subunit

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCAGGG TCTACCACTC CAATCAACTC GATGTGTTGA AAGAACTGAT GGTTGAGCTG 
ATGAAACGGC ATCCGATCAG GGATCCGTTC GAGCCTGAAA TGATACTGGT GCAAAGCCCC 
GGTATGGCGC AATGGCTACA GATTGAACTG GCGAATTGCT TTCACATTGC CGCTAATATT 
CAGTTTCCGC TGCCGGGGGT CTTTTTGTGG GATATGTGCC GACGCCTGAT GCCGGATATC 
CCCAAAGAGA GCGTATTCAG CAAAGCGGCG ATGAGCTGGA AGCTGATGCA CCTGCTGCCG 
CAACAGCTTG CGGAGCCTGA CTTTGCGCTG CTCGCCAACT ACCTTCGGGA TGATGCCGAC 
GGGCGCAAAC TGCATCAGTT GTCCGCCCGC GTGGCGGATC TGTTCGACCA GTATCTGATT 
TATCGGCCCG ACTGGATTAA CGCCTGGCAA CGCGGCGCAT GGGTGGAGGA CGCCGGAGAG 
GCGCAGCGCT GGCAAGCACC GCTGTGGCGG GCGTTGGTCG CGCATACTCA TCAACTTGGG 
CAGCCGGAGT GGCACCATTC CAGCCTGTAT CAGCAGTTTA TCGGCCGTCT GGAACTGGCT 
GATACTTGCC CGCCCGGTTT GCCGGAGCGG GTGTTCATCT GCGGTATTGC CGCCTTACCG 
CCCATCTATC TGCAAGCCTT GAAAGCGTTG GGCAAACACA TCGATATCCA CCTGCTGTTC 
ACCAATCCAT GCCGCTACTA TTGGGGGGAT ATTCAGGACG AATCTTTCCT TTCCCGCTTG 
AAAACACGGC AGTGGCAGCG TTATCGCGAA AAACAGGTGA CATCGGATGT GCGGCCGCTG 
TTTCGTCAGC CGGAGCGTGC CGATGGGCTA TTCGGCGATG ACGGCGAACA ACAGGTGGGC 
AATCCCCTGC TCGCATCGTG GGGAAAACTG GGGCGCGATA ATCTGTTCCT GCTGGAACAA 
CTGGACGAAA CCGTAGGCAT TGATGCATTT GCCGACATGG CTTCCGATAC GCTGTTGGCT 
TCGCTGCAGA GGGATATTCT GGAACTGGAG GATAGCCGCA TTATCGCTAC GGACGGCATA 
ACGCTGGCGA GCAGCAGCCG TAAACGCACG CTTTCGCCAG CGGATCGCTC TGTGTCGTTG 
CACGCTTGCC ACAGCCCGCA ACGCGAGGTG GAAGTGTTGC ATGATCAATT GCTGGCGATG 
ATGGCGGAGG ACAGTACCCT GATGCCGCGG GACATCATTG TGATGGTGGC GGATATCGAT 
AGCTATTCCC CTTTTATTCA GGCGGTGTTC GGCAATGCGC CGGAAAATCG CTATTTACCC 
TTTGCATTGT CAGATCAGCG TGCGCGTCAC GCTCACCCCG CGCTGCAGGC GGTGTTGTCG 
CTGCTGGCGT TGCCGGATAG TCGTTTCACG GCTGAACAGG TGTTGGCGTT ACTGGAGGTG 
CCGTCGTTGG CGGGCAAATT CGCCATCGAC GAAGAAGGGC TGCGGCACCT AAGGATGTGG 
GTGGCCGAAT CCGGTGTACG TTGGGGACTG GATGATGACA ATGTACGAGA GCTGCTGTTG 
CCGGTGACGG GGCAGCACAC CTGGCGCTTC GGCCTGACTC GCATGCTGCT GGGCTATGCG 
ATGGAGAGTA GAGCGGGTGA TTGGTTAGGT GTGCTGCCTT ACGACGAATC GAGTGGTCTT 
GTTGCCGAAC TGGCCGGCAA TCTGGCGGAT TTTCTGATGC AGCTAAGTCA GTGGAAACAG 
CGTTTGCAGG AAGCGCGCTC GCTGACGGAT TGGCAGCCGT TATGCCGCCA GTTATTAGAC 
GGTTTTTTTC TGCCGGATGC CGATACCGAA GCGGCGTTGA CGCTGATTGA AACCCAGTGG 
CAACAAATTC TGTCTACCGC CATGTTGACG GGATACGCAC AGAATGTGCC GGTCGGTACG 
TTGCGCGATG AGCTGGCTGC TCGTCTGGAG AGTGAACGCC TCAGCCAGCG TTTTCTCGCC 
GGGGCCATCA ACTTCTGTAC TCTGATGCCG ATGCGTTCCA TTCCATTTCG GGTGGTATGC 
CTGCTGGGCA TGAACGATGG CGTGTATCCG CGTGTTCTGC CGCCGCTGGG GTTCGATCTA 
ATGGCGCGCT CCCGTCGGCG GGGGGATCGC AGCCGCCGCG AAGACGATCG CTACCTGTTT 
CTGGAGGCGC TTTTGTCCGC TGGGCAGCGT CTCTACATCA GCTTCATGGG GCATTCAATA 
CAGGACAACA CCCGGCGTTA CCCTTCAGTG CTGGTAACGG AACTGATGAA TTATATCGGC 
CAAAGCTACT GCTTGCCGGG AGATGAAAGC CTGGATCTTG ACGCCAGCAG CGAGCGCGTT 
ATTCAGGCGT TGAGTCATGA GCACCCGCGT ATGCCGTTCG ATCCCGCCGG TTTTTGTGCC 
CCGGAGCCGG AAAGTTTCGC GGCGGAGTGG TTGCCGGCTG CCGGAGGCAA AGGGGTATGC 
CAACCTGATT TCGATCGCGC CTTGCCGGAG CGTTATGACA GCGACATCAC GCTGGATGAC 
CTGCAACGAT TTTATCGTCA TCCGGTGCGC GCATTCTTTC AGTTACGCCT TGGCGTTTAT 
TTTCAGCTCG ACGATCAGGA AATGCAGGAT CAAGAGCCTT TCGAGGTGGA TAACCTCAGC 
CGTTATCAGA TGAATGTACA GTTGCTTAAT GCGTTGATAG AACAAGGTGA TACGGATGCC 
TTGTATCGAC GCATGCGTGC GGCGGGTGGT TTGCCGTATG GCGCGTTCGG TGAGCTCTAC 
TGGCAGACCC AGCAGGAGGA CATCCGGGAA CTGGCAGAAC GGGTGCGGGG AGAGTGGCGG 
CCGGAAACCC ACCACACACG CGAGCTGAAT CTGACGATAA ACGGCGTCAG GCTCAGCGGT 
TGGTTAAAAC AGGTTCAGGA CGACGGCCTG CTGCGCTGGC GGCCTGGGAA ATTGTCCATG 
ACGGACGGCA TGATGCTATG GCTGGAGCAT CTTGCCTGGT GCCTGGCCGG CGGGCAGGGG 
GAAAGTCGAA TCTATGGTCG TCAATCGACG GGGTGGCGTT TCCCCGCCAT GTCCCGGCAG 
CAGGCCGGGG ATGAGATGGC GTCGTTGATC GACGGCTACC GTCAGGGGAT GAACCGGCCG 
TTGTTGTTGC TTAATCGTAC TGGCGGCGCC TGGCTGGAGG CCGTCTACGA TCGCGATACC 
GATCGTTTGC TGGATGATGC AACGGCGCAA CGCAAAGCAC GGCAAAAGTT GCTGGATGCC 
TGGCAGGGAA ACCAGATGGT CAGTGGCGAA AGTGAAGATG ACTACCTGCG GCGCATTGTT 
CGCGCTATGG ACGACGAACG TATCGTGCAG GTGATGGACG CGGCAAAAAT CTGGCTATTG 
CCGCCGCTGA GAATGAATCA GTGTTAG 

 

Protein sequence

MFRVYHSNQL DVLKELMVEL MKRHPIRDPF EPEMILVQSP GMAQWLQIEL ANCFHIAANI 
QFPLPGVFLW DMCRRLMPDI PKESVFSKAA MSWKLMHLLP QQLAEPDFAL LANYLRDDAD 
GRKLHQLSAR VADLFDQYLI YRPDWINAWQ RGAWVEDAGE AQRWQAPLWR ALVAHTHQLG 
QPEWHHSSLY QQFIGRLELA DTCPPGLPER VFICGIAALP PIYLQALKAL GKHIDIHLLF 
TNPCRYYWGD IQDESFLSRL KTRQWQRYRE KQVTSDVRPL FRQPERADGL FGDDGEQQVG 
NPLLASWGKL GRDNLFLLEQ LDETVGIDAF ADMASDTLLA SLQRDILELE DSRIIATDGI 
TLASSSRKRT LSPADRSVSL HACHSPQREV EVLHDQLLAM MAEDSTLMPR DIIVMVADID 
SYSPFIQAVF GNAPENRYLP FALSDQRARH AHPALQAVLS LLALPDSRFT AEQVLALLEV 
PSLAGKFAID EEGLRHLRMW VAESGVRWGL DDDNVRELLL PVTGQHTWRF GLTRMLLGYA 
MESRAGDWLG VLPYDESSGL VAELAGNLAD FLMQLSQWKQ RLQEARSLTD WQPLCRQLLD 
GFFLPDADTE AALTLIETQW QQILSTAMLT GYAQNVPVGT LRDELAARLE SERLSQRFLA 
GAINFCTLMP MRSIPFRVVC LLGMNDGVYP RVLPPLGFDL MARSRRRGDR SRREDDRYLF 
LEALLSAGQR LYISFMGHSI QDNTRRYPSV LVTELMNYIG QSYCLPGDES LDLDASSERV 
IQALSHEHPR MPFDPAGFCA PEPESFAAEW LPAAGGKGVC QPDFDRALPE RYDSDITLDD 
LQRFYRHPVR AFFQLRLGVY FQLDDQEMQD QEPFEVDNLS RYQMNVQLLN ALIEQGDTDA 
LYRRMRAAGG LPYGAFGELY WQTQQEDIRE LAERVRGEWR PETHHTRELN LTINGVRLSG 
WLKQVQDDGL LRWRPGKLSM TDGMMLWLEH LAWCLAGGQG ESRIYGRQST GWRFPAMSRQ 
QAGDEMASLI DGYRQGMNRP LLLLNRTGGA WLEAVYDRDT DRLLDDATAQ RKARQKLLDA 
WQGNQMVSGE SEDDYLRRIV RAMDDERIVQ VMDAAKIWLL PPLRMNQC