Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2954 |
Symbol | |
ID | 8089787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3442349 |
End bp | 3444328 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644837036 |
Product | putative exonuclease |
Protein accession | YP_002988551 |
Protein GI | 242240370 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA CACAAATGGA GATCAAAGGT TTTAAGAGCT TTGATAATGT AGGGCAAACT ATAAATATAA ATTCATTCAC CAGCTTAATT GGAGGGAACG GAACAGGGAA AACGGCAGTT TTACTCGCAT TAACAAGAAT GTTTGGCGTC AAAAGCTCCG ATAGAATTAT TCAAGTTGAT GATTTTTATG TTCCTCCTGG GGATGAAATC GATACTCAAG ATGAAAGAGA GCTATCAGTT CGTGTAAAAT TCGAATTCGC AGATTTGGAA GATGGTGAGG ACAATACAGT TGCAGATTTC TTTAAGCATT TAGTTTCAAG TGAAGCGGCA GAGATCCCAT ACTGTACTGC AAAATTAAAA GCAAAATGGA CAAAGACTAA CCTTGCAGAA GGAGATATAG AAAGCGACCT AGTGTGGGAA ATCGGGGAGT ATGAAAAAAA TATAACAGCA TATGAAAGAT CGAAAATTCA TGTTCATTAT GTCCCTGCAT ACCGAGATCC TGCCCAACAA CTGAAGCAAA CAGCCGGAAC CATCATGCAC CGTCTGATAA ATGCAGTTGA ATGGTCTGAT CAAATGGCGT CAACAGTTGA TGAGGTTGCT GTATCAATCG GAAACCAGTT CCAAGAAGAA GTTGGGGTTC AGACGATAAC ATCGTCATTA GGTAGAAATT GGAAAACCCT CTTCACTGGG GGTTACTTTG AAAAGCTTCA AATTAAGCCA GTAGTGAATG GAATTGAAGA TGTATTAAAA CATATCGACA CTGTCTTTTT ACCCAGTCCA GATACACAAC CATTACCAAC TGAAAGATTG AGTGATGGTA TGAAATCATT ATTTTATTTA TCTTTAGTCA AATCTGCGTT TGACATTGAA GATGAGATAA TCAATTCTGA TGGGAAACAG TTATCAATAT CAGTAGAAGC ATTAGCCCCC CCAAATCTAA CTATAATATT AATAGAAGAA CCTGAAAACC ACCTTTCACC TCAATATTTA GGAAGGATAG TTAAACTGTG TGAAGAGATA TCAGAGAATG ATCGGGCACA GGTAGTTTTG ACTACACATG CACCATCTTT ACTTAATAGG GTGGAGCCAG AGAATATAAG ATATTTCCGT CTTCATGATA ATAAAAATAC AATTGTCAAA GAAATATTAT TACCAAGGGA AGATAAAGAT GATGCCGAGA ATGTTGATAC TTTTACATAT GTTAAGGAAG CTGTAAAAGC ATATCCGGAA ATTTATTTTG CAAAAGTTGT TATACTTGGT GAAGGTGATA GTGAAGAGAT CGTCATTCCT AAAATAGCAC AAGTAAATGG AATAGAGATT GACACTTCAT TAATAACATT TGCACCATTG GGTGGTCGAT ATGTTAATCA TTTTTGGAAA CTTCTAAATG AGCTTTCAAT TCCTCATGTA ACTCTTCTCG ATTATGATTT CAGGAGAGGG GGTGGAGGTT GGGGAAGGAT TAAATACGCG GTAAAACAAC TTATTTCAAT TGGAGTAGAC AAGAATATAT TGCTTAAAAT GAGTGATGGG GTTTTGTCTG ACGAAGATTT AGAAGTAATG CATTCATGGG ATGAAGATAG GGATGAAGAA ATTGCATGGA TAGAGTCGTT AAAGGAATAT GGTGTGTACT TTTCCTTCCC TTATGATTTA GATTGGCTAA TGCTAAATGA ATTCTTTGAG GATTACAAAA AATTTGCACC TGAAAATGGA GGACCAAGAT TGCCAAAGGA TGATGATCCT GAATATAACA AGAAAGTTAA AGCTGCAATA GCTTCAGTTT TGAAAAAAGA AGAAAAAGAT ATTGATATTA GTAAGTTTGA TGACTTCGAG AAGTACTTTT GGTACCGCTA CTTATTTTTA GGAAGAGGTA AGCCATTATC GCATAATTAT GTTCTATCAA AAATGGAAGA CGATAAGTTA AGAGATAACA GTCCTGAAGT TCTCAATGAA CTTATCGAAA CAGTAAGAGG TCTTCTGTGA
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Protein sequence | MKITQMEIKG FKSFDNVGQT ININSFTSLI GGNGTGKTAV LLALTRMFGV KSSDRIIQVD DFYVPPGDEI DTQDERELSV RVKFEFADLE DGEDNTVADF FKHLVSSEAA EIPYCTAKLK AKWTKTNLAE GDIESDLVWE IGEYEKNITA YERSKIHVHY VPAYRDPAQQ LKQTAGTIMH RLINAVEWSD QMASTVDEVA VSIGNQFQEE VGVQTITSSL GRNWKTLFTG GYFEKLQIKP VVNGIEDVLK HIDTVFLPSP DTQPLPTERL SDGMKSLFYL SLVKSAFDIE DEIINSDGKQ LSISVEALAP PNLTIILIEE PENHLSPQYL GRIVKLCEEI SENDRAQVVL TTHAPSLLNR VEPENIRYFR LHDNKNTIVK EILLPREDKD DAENVDTFTY VKEAVKAYPE IYFAKVVILG EGDSEEIVIP KIAQVNGIEI DTSLITFAPL GGRYVNHFWK LLNELSIPHV TLLDYDFRRG GGGWGRIKYA VKQLISIGVD KNILLKMSDG VLSDEDLEVM HSWDEDRDEE IAWIESLKEY GVYFSFPYDL DWLMLNEFFE DYKKFAPENG GPRLPKDDDP EYNKKVKAAI ASVLKKEEKD IDISKFDDFE KYFWYRYLFL GRGKPLSHNY VLSKMEDDKL RDNSPEVLNE LIETVRGLL
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