Gene Dd703_2954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2954 
Symbol 
ID8089787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3442349 
End bp3444328 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content36% 
IMG OID644837036 
Productputative exonuclease 
Protein accessionYP_002988551 
Protein GI242240370 
COG category[L] Replication, recombination and repair 
COG ID[COG3593] Predicted ATP-dependent endonuclease of the OLD family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA CACAAATGGA GATCAAAGGT TTTAAGAGCT TTGATAATGT AGGGCAAACT 
ATAAATATAA ATTCATTCAC CAGCTTAATT GGAGGGAACG GAACAGGGAA AACGGCAGTT
TTACTCGCAT TAACAAGAAT GTTTGGCGTC AAAAGCTCCG ATAGAATTAT TCAAGTTGAT
GATTTTTATG TTCCTCCTGG GGATGAAATC GATACTCAAG ATGAAAGAGA GCTATCAGTT
CGTGTAAAAT TCGAATTCGC AGATTTGGAA GATGGTGAGG ACAATACAGT TGCAGATTTC
TTTAAGCATT TAGTTTCAAG TGAAGCGGCA GAGATCCCAT ACTGTACTGC AAAATTAAAA
GCAAAATGGA CAAAGACTAA CCTTGCAGAA GGAGATATAG AAAGCGACCT AGTGTGGGAA
ATCGGGGAGT ATGAAAAAAA TATAACAGCA TATGAAAGAT CGAAAATTCA TGTTCATTAT
GTCCCTGCAT ACCGAGATCC TGCCCAACAA CTGAAGCAAA CAGCCGGAAC CATCATGCAC
CGTCTGATAA ATGCAGTTGA ATGGTCTGAT CAAATGGCGT CAACAGTTGA TGAGGTTGCT
GTATCAATCG GAAACCAGTT CCAAGAAGAA GTTGGGGTTC AGACGATAAC ATCGTCATTA
GGTAGAAATT GGAAAACCCT CTTCACTGGG GGTTACTTTG AAAAGCTTCA AATTAAGCCA
GTAGTGAATG GAATTGAAGA TGTATTAAAA CATATCGACA CTGTCTTTTT ACCCAGTCCA
GATACACAAC CATTACCAAC TGAAAGATTG AGTGATGGTA TGAAATCATT ATTTTATTTA
TCTTTAGTCA AATCTGCGTT TGACATTGAA GATGAGATAA TCAATTCTGA TGGGAAACAG
TTATCAATAT CAGTAGAAGC ATTAGCCCCC CCAAATCTAA CTATAATATT AATAGAAGAA
CCTGAAAACC ACCTTTCACC TCAATATTTA GGAAGGATAG TTAAACTGTG TGAAGAGATA
TCAGAGAATG ATCGGGCACA GGTAGTTTTG ACTACACATG CACCATCTTT ACTTAATAGG
GTGGAGCCAG AGAATATAAG ATATTTCCGT CTTCATGATA ATAAAAATAC AATTGTCAAA
GAAATATTAT TACCAAGGGA AGATAAAGAT GATGCCGAGA ATGTTGATAC TTTTACATAT
GTTAAGGAAG CTGTAAAAGC ATATCCGGAA ATTTATTTTG CAAAAGTTGT TATACTTGGT
GAAGGTGATA GTGAAGAGAT CGTCATTCCT AAAATAGCAC AAGTAAATGG AATAGAGATT
GACACTTCAT TAATAACATT TGCACCATTG GGTGGTCGAT ATGTTAATCA TTTTTGGAAA
CTTCTAAATG AGCTTTCAAT TCCTCATGTA ACTCTTCTCG ATTATGATTT CAGGAGAGGG
GGTGGAGGTT GGGGAAGGAT TAAATACGCG GTAAAACAAC TTATTTCAAT TGGAGTAGAC
AAGAATATAT TGCTTAAAAT GAGTGATGGG GTTTTGTCTG ACGAAGATTT AGAAGTAATG
CATTCATGGG ATGAAGATAG GGATGAAGAA ATTGCATGGA TAGAGTCGTT AAAGGAATAT
GGTGTGTACT TTTCCTTCCC TTATGATTTA GATTGGCTAA TGCTAAATGA ATTCTTTGAG
GATTACAAAA AATTTGCACC TGAAAATGGA GGACCAAGAT TGCCAAAGGA TGATGATCCT
GAATATAACA AGAAAGTTAA AGCTGCAATA GCTTCAGTTT TGAAAAAAGA AGAAAAAGAT
ATTGATATTA GTAAGTTTGA TGACTTCGAG AAGTACTTTT GGTACCGCTA CTTATTTTTA
GGAAGAGGTA AGCCATTATC GCATAATTAT GTTCTATCAA AAATGGAAGA CGATAAGTTA
AGAGATAACA GTCCTGAAGT TCTCAATGAA CTTATCGAAA CAGTAAGAGG TCTTCTGTGA
 
Protein sequence
MKITQMEIKG FKSFDNVGQT ININSFTSLI GGNGTGKTAV LLALTRMFGV KSSDRIIQVD 
DFYVPPGDEI DTQDERELSV RVKFEFADLE DGEDNTVADF FKHLVSSEAA EIPYCTAKLK
AKWTKTNLAE GDIESDLVWE IGEYEKNITA YERSKIHVHY VPAYRDPAQQ LKQTAGTIMH
RLINAVEWSD QMASTVDEVA VSIGNQFQEE VGVQTITSSL GRNWKTLFTG GYFEKLQIKP
VVNGIEDVLK HIDTVFLPSP DTQPLPTERL SDGMKSLFYL SLVKSAFDIE DEIINSDGKQ
LSISVEALAP PNLTIILIEE PENHLSPQYL GRIVKLCEEI SENDRAQVVL TTHAPSLLNR
VEPENIRYFR LHDNKNTIVK EILLPREDKD DAENVDTFTY VKEAVKAYPE IYFAKVVILG
EGDSEEIVIP KIAQVNGIEI DTSLITFAPL GGRYVNHFWK LLNELSIPHV TLLDYDFRRG
GGGWGRIKYA VKQLISIGVD KNILLKMSDG VLSDEDLEVM HSWDEDRDEE IAWIESLKEY
GVYFSFPYDL DWLMLNEFFE DYKKFAPENG GPRLPKDDDP EYNKKVKAAI ASVLKKEEKD
IDISKFDDFE KYFWYRYLFL GRGKPLSHNY VLSKMEDDKL RDNSPEVLNE LIETVRGLL