Gene Dd703_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2887 
Symbol 
ID8089720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3368316 
End bp3369683 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content53% 
IMG OID644836969 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002988484 
Protein GI242240303 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATA ATAAAATGAC GCCTGTTGAG TTAAGGGCGA CGTGGGGGCT AGGCGCCGTT 
TTTTCCCTGC GTATGCTGGG CATGTTTATG GTGCTCCCCG TGCTGGCCAC TTATGGTATG
GCCTTACAGG GGGCCAGCGA GTCACTCATC GGCGTGGCCA TTGGCATCTA TGGTCTGATG
CAGGCGATAT TTCAGATTCC TTTCGGGCTA ATGTCCGATC GGCTTGGGCG TAAACCCCTC
ATCATTGGCG GTTTGGTGAT CTTTATCCTT GGTAGCGTCA TTGCCGCACT CAGCCATTCC
ATTTGGGGGA TCATTCTGGG CCGGGCGTTA CAGGGAGCCG GTGCAATTTC CTCCGCCGTT
ATGGCCCTGC TTTCCGATTT GACCCGCGAG CAAAATAGAA CCAAAGCCAT GGCATTTATC
GGCGTTAGTT TCGGCGTCAC ATTCGCCATT GCCATGGTTA TCGGCCCGAT TGTCACTCAT
GCTTTCGGGT TGCAGGCATT ATTTTGGGGA ATTGCGCTGC TTTCGCTGGT AGCCATCGCC
ATCACCATTT TGGTGATTCC TTCAGCATCA GCACATGTGT TAAACCGTGA ATCAGCCATT
ATCCGTAGCG GGATCCGCAA GGTTCTCGCT AACAGCCAGT TGCTGAAGCT CAACTTCGGG
ATCATGTGTT TGCATATACT GTTGATGTCG AGCTTTGTCG CCCTTCCCCG GGTTATGGAG
CAGGCAGGGC TCGCACCGCA AGATCAGTGG AAAGTGTATC TGGTTACTAT GCTGGTATCG
TTTGTCGCCG TTGTGCCGTT TGTCATGTAT GCGGAAATCA GGCGGCGGAT GAAACAAGTA
TTTATTATCT GCGTTATGCT GCTCACCGCA GCGGAGCTGG TACTGCTGCA AAGCCAGCAC
TCGCTGGAAC AAACGTTGAT CGGCATTCAG ATTTTCTTCA TCGGATTCAA CGTGATGGAA
GCTATTCTAC CGTCACTGAT CAGTAAAGAA GCGCCAACAG GTTATAAGGG AACCGCGATG
GGCGTCTATT CGACGACTCA GTTCATCGGG GTCGCATTGG GGGGCAGCCT GGGTGGTGCG
CTTTACGACC TTCAGGGCGC ATCGCTGGTT TTTAGCGCCG GAATCGGGCT GGGTTTAGTT
TGGCTGCTGG TCAGTAGCAC CATGAAGGAA CCCCCCTATC TCAGCAGTCT GCGTATTACG
CTGACGGATA CCGCCCTTCA GGATGCCGGG CTGCCGCAAA AACTGCAGCA ACACCCTGGC
GTAGCAGATG TCGTCATTGT GCCGGACGAA GCGAGCGCTT ACATAAAAAT CGACCGCAAA
AAAACCAACC GCCAGCAGTT GGAGCAGTTG GTGAGTCAAT ATAGTTAG
 
Protein sequence
MNDNKMTPVE LRATWGLGAV FSLRMLGMFM VLPVLATYGM ALQGASESLI GVAIGIYGLM 
QAIFQIPFGL MSDRLGRKPL IIGGLVIFIL GSVIAALSHS IWGIILGRAL QGAGAISSAV
MALLSDLTRE QNRTKAMAFI GVSFGVTFAI AMVIGPIVTH AFGLQALFWG IALLSLVAIA
ITILVIPSAS AHVLNRESAI IRSGIRKVLA NSQLLKLNFG IMCLHILLMS SFVALPRVME
QAGLAPQDQW KVYLVTMLVS FVAVVPFVMY AEIRRRMKQV FIICVMLLTA AELVLLQSQH
SLEQTLIGIQ IFFIGFNVME AILPSLISKE APTGYKGTAM GVYSTTQFIG VALGGSLGGA
LYDLQGASLV FSAGIGLGLV WLLVSSTMKE PPYLSSLRIT LTDTALQDAG LPQKLQQHPG
VADVVIVPDE ASAYIKIDRK KTNRQQLEQL VSQYS