| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2753 |
|---|
| Symbol | |
|---|
| ID | 8089574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3214002 |
|---|
| End bp | 3214736 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644836825 |
|---|
| Product | RNA methyltransferase, TrmH family, group 1 |
|---|
| Protein accession | YP_002988352 |
|---|
| Protein GI | 242240171 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0620173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAGA ATATACGCAT TGTGCTGGTG GAGACATCCC ATACCGGCAA TATGGGGTCG
ACCGCCAGAG CGATGAAGAC GATGGGATTA AGCCGTCTTT TTCTGGTTAA CCCCCTGGTC
AAACCTGACT CTCAGGCGAT TTCACTGGCT GCCGGCGCCA GCGATGTCAT CAGCCATGCA
ACAATTGTCG AGACGCTGGA TCAGGCGCTC GAAGGATGCA GTTTGGTGAT TGGAACCAGT
GCGCGATCGC GTACATTGCA ATGGCCAATG CTCGAGCCGA GGGAGTGCGG TGTGTTGAGC
GCCGAAGAAG CACGTCATGC TCCGGTTGCC ATTGTCTTCG GACGTGAACG TGTCGGGTTA
ACCAACGACG AATTGCAAAA GTGCCATTAC CATGTCGCTA TTCCCGCCAA TCCTGAATAC
AGCTCACTGA ATCTGGCAAT GGCGGTGCAA CTCCTGTCAT ACGAAATCCG GGTTGCCTGG
TTGGATAACC TCAAAGCGGA AGAACCTGCT TATGAGGAAA GTCCCTATCC GTTGGTGGAC
GATCTTGAAC GCTTTTACCA GCATCTTGAG CAGACGTTGC TGCAAACAGG TTTTATCCGT
CACTCTCATC AAGGGCAGGT GATGCATAAA TTGCGCCGTC TGTTTACCCG GGCTCGCCCA
GAAAGCCAGG AGCTCAATAT CTTGCGCGGT ATCCTGAGTT CGATCGCCAC GAATCGACAC
CCGCAGGGGA AATAG
|
|---|
| Protein sequence | MLENIRIVLV ETSHTGNMGS TARAMKTMGL SRLFLVNPLV KPDSQAISLA AGASDVISHA
TIVETLDQAL EGCSLVIGTS ARSRTLQWPM LEPRECGVLS AEEARHAPVA IVFGRERVGL
TNDELQKCHY HVAIPANPEY SSLNLAMAVQ LLSYEIRVAW LDNLKAEEPA YEESPYPLVD
DLERFYQHLE QTLLQTGFIR HSHQGQVMHK LRRLFTRARP ESQELNILRG ILSSIATNRH
PQGK
|
|---|
| |