Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2705 |
Symbol | |
ID | 8088392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 3165268 |
End bp | 3166671 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644836777 |
Product | multidrug efflux system protein MdtE |
Protein accession | YP_002988304 |
Protein GI | 242240123 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.11232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACT CGCCTGCTGC CGTTCGCTGG CAACTGTGGA TCGTGGCCTT CGGCTTTTTC ATGCAGACAC TGGATACCAC CATCGTCAAC ACGGCATTAC CGTCGATGGC GGTCAGCCTG AACGAAAGTC CGCTACATAT GCACGCGGTG ATTGTCGCCT ATGTGCTGAC CGTCGCCATG GTGCTGCCCG CCAGCGGTTG GCTGGCGGAT AGACTCGGTG TGCGCAATGT ATTTTTATCC GCCATCCTGT TGTTCAGCCT CGGCTCGCTG CTGTGCGCCC GTTCGGAAAC CCTCAACGAA CTGTTGCTAT CGCGCGTGGC GCAGGGGATC GGCGGCGCGA TGATGGTGCC CATCGGCCGG TTGACCGTGA TGAAACTGGT GCCCAGAGAT CAGTACATGG CGGCGATGAC CTTCGTGACC CTACCAGGGC AGATCGGCCC GTTGATGGGG CCGTCGCTCG GCGGTTTTCT GGTGCAGTAC GCCAGCTGGC ACTGGATCTT CCTGATCAAT ATTCCGGTGG GCATTATCGG CGCCATCGCC ACCGGGCTGC TGATGCCCAA TTTCACCATG CCCGCCCGAC GCTTCGACCT GCGTGGTTTT TTCTGTTTAG TCGTCTGTAT GGCGACCTTG ACGCTGGCGT TGGATGGGCA AAAAAGCCTG GGTTTTTCGC CCGCGATGAT CACCGCGCTG ATCGGCACCG GCAGCCTGGC GCTGGCGGGT TACTGGCTGC ACGCCAGACA CAACGAACAG GCGCTGTTCA ACCTGCGGCT GTTCAACACT CACAGCTTTA CCATCGGGTT GTTCGGCGGC TGGCTGGCGC GCATCGGCAG CGGCATGTTG CCCTTTATGA CGCCGGTCTT CCTGCAACTC GGCCTGGGTT ACTCGCCGTT CCATGCCGGC CTGATGATGA TCCCGCTGGT GATGGGCAAT ATGGGGATGA AACGACTGGT GGTGAAGATC GTCAACCGTT TCGGGTATCG CAACGTGCTG ATCGCCTCGA CGCTGATGTT GGCGATCGCG TCCCTCCTGT TCGCGCTGGT GGCGATGATG AACTGGCGCT GGCTGATGCC TTGCGTGCTG TTTATAGTCG GTATGGTCAA CGGCATTCGT TTCTCCACCA TGAATACCCT GACGCTGAAA GACCTGCCGG ATGACCTTGC CAGCGGCGGC AACAGCCTGC TGTCGATGTC GATGCAGTTG TCCACCAGCA TGGGGGTCAG TATCGCCGGC CTGCTGTTGG GGCTGTTCGC GCACCAGCAT CTGGTCGCCG GAACGGCGGA AACCAATATC ATCTTCCTCT ATACCTATCT GTGTATGGCG GCCGTCATGG CGTTTCCGGC GTTGATATTC AGCCGGGCGC CCGCCGACAT TCTGCAACAG GCAACATTGC CGCGTCGTTC ATGA
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Protein sequence | MTDSPAAVRW QLWIVAFGFF MQTLDTTIVN TALPSMAVSL NESPLHMHAV IVAYVLTVAM VLPASGWLAD RLGVRNVFLS AILLFSLGSL LCARSETLNE LLLSRVAQGI GGAMMVPIGR LTVMKLVPRD QYMAAMTFVT LPGQIGPLMG PSLGGFLVQY ASWHWIFLIN IPVGIIGAIA TGLLMPNFTM PARRFDLRGF FCLVVCMATL TLALDGQKSL GFSPAMITAL IGTGSLALAG YWLHARHNEQ ALFNLRLFNT HSFTIGLFGG WLARIGSGML PFMTPVFLQL GLGYSPFHAG LMMIPLVMGN MGMKRLVVKI VNRFGYRNVL IASTLMLAIA SLLFALVAMM NWRWLMPCVL FIVGMVNGIR FSTMNTLTLK DLPDDLASGG NSLLSMSMQL STSMGVSIAG LLLGLFAHQH LVAGTAETNI IFLYTYLCMA AVMAFPALIF SRAPADILQQ ATLPRRS
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